Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1929 |
Symbol | |
ID | 3904291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2266390 |
End bp | 2268336 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637879266 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_481033 |
Protein GI | 86740633 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.362101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCA TCCGGAGCGA GGTCACCTCG CCCACCTCCG CCATCTCGCC CATGTCTCCG ACTCTCCATC CGCGGCCGGG CCCCCCACGG TCGGCGACGA CCGGCGGGCC GACCCACGCG ACCCACGGCA GCCACCCGAC CGACCCGACC GGCACGACCG ACGCTCGCGG GCACCATGAG CCGCTCGACG CCGAGACGTT GCACGACGCA CTGGACGTCG CGGCCGCCCG GCATCCCGAC ACGCCCGTCA CGTTCCCGTC CACCCACGAG GTGATCTCGC TGCGGGACCT CGCGGCCACC TCCCGGATCA TCGCGGCCGC GCTGACGACG GACGGGGTCC AGGCCGGCGA GCGGGTTGGG GTGCTGGCCG CGAACTCGGC CGAGTTTCTG CTCGCGCTCT TCGCGATCAG TCGGGCGGGC GCGGCGGCCT GTCCGCTGCC ACTGCCGACC ACCGCGCACG ACCTCAACGG CTATGCCGAC CGGGTCTCGC GCACTACGGC GGCCGCGGGC ATCCACCGGG TGGTCACCGG CGGCCGAGTG TCGGCCATCC TGCGCCGCAC GGCCGACCGG CTCGGCGGAC TCCGGTTCCT CCCCGCGGCT GACCTGGTCC GCGACGTCGG TCCCGCCACG CCCACACGCC AGCCACATCC GGGTCCCGAA TGCCCGGTGG GTGCGGTGGG TGCGGTGGGT GCGGACGACG TCGCGATCGT GCAGTTCACC TCCGGCAGCA CCGCGGCCCC GAAGGGCGTG GTGCTCAGCC ACCGCGCCGT GCTGTGCGGC ATCCGCGCGA TCATCGACGG CATCCGGCTC GGTGAAGGCG ATCACGGCGG AATCTGGTTG CCGCTGTTCC ACGACATGGG GCTGTTCGCG ACCCTCAGCG CGATCATGAC CGGCATCCCG ATGACCGTCT GGTCCCCGGC GGACTTCGTC CGTGACCCCG CCGGCTGGCT GCGCTCGTTC CTCGCCAGCG GCGCCACGAT CTCGCCGGCG CCGAACTTCG CCTACGACGA CCTCGTCCGG GCGATCGACC CAGACGAGGT ACCCGGGCTG GACATGCGCC GGTGGCGCGT CGCGCTGAAC GGAGCCGAGC CGGTCTCCGC GGTCGGCGTC GAGCGCTTCC TCGACCACTT CGCGCCGGCC GGGTTCGCCC CCACGGCGAT GTTCCCCGTG TACGGGATGG CCGAGGCCAC CCTGGCCGTG GCCTTCCCGC CGCTGGGCCG CGCCCCCGTG GTCACCTGGG TCGACCGGGA CCGACTCGCC GCCGAGGGAA TCGTGACGGA GGTCCCGCGC GAGCATCCGC GCGCCAAGGG GCTGGTCGCC GTCGGCCGGC CGGTCCGCGA CATCCGGATT CGCATCGCCG ACCTGCACGG TGACGTCCTG GCCGATCCGC TCGGCGACGG TCTGGCGCCG AGCCTGCGGG TGGGCGAGAT CCAGATCCGG GGTGGTTCGG TCACCTCGGG CTACCTCACC GCGGGGGGCC TGACGACCGG GGGCTTCACA GCGGACGGCT GGCTGCGCAC CGGCGACCTC GGCTTCCAGC GCGGCGACGA TCTGTTCGTG ACCGGCCGGG ACAAGGAAAT GATCATTATA CGCGGCGTGA ACTACTACCC CGAGGACGCC GAAGCGGCGG TGCGTGACCT TCCGGGCGTG CACCGACGTC GCGTCGTCGC CTTCGGCTCC CCCGACCAGC CGGACGCCGC CGGCAGCCCT CCGGACGCCA CCGGAGCGAA GGCTGCCGGC GGCGTCACGG TGGTCGGCGA GACCGCGCTG ACCGAGCCCG CGGACCGAGC CCGACTCGCG ACCGACCTGC GGATGGCGGC GACTGCGGCG CTGGGGCTGT CCACGGTGAC GGTGCGTCTG GTCGAGCCCG GCGCGCTGCC CCGCACCTCC AGCGGCAAAT TCCAACGGCT GGCGGTACGC GACCTGGTCG GGCGCGGCGT GCTCTGA
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Protein sequence | MPAIRSEVTS PTSAISPMSP TLHPRPGPPR SATTGGPTHA THGSHPTDPT GTTDARGHHE PLDAETLHDA LDVAAARHPD TPVTFPSTHE VISLRDLAAT SRIIAAALTT DGVQAGERVG VLAANSAEFL LALFAISRAG AAACPLPLPT TAHDLNGYAD RVSRTTAAAG IHRVVTGGRV SAILRRTADR LGGLRFLPAA DLVRDVGPAT PTRQPHPGPE CPVGAVGAVG ADDVAIVQFT SGSTAAPKGV VLSHRAVLCG IRAIIDGIRL GEGDHGGIWL PLFHDMGLFA TLSAIMTGIP MTVWSPADFV RDPAGWLRSF LASGATISPA PNFAYDDLVR AIDPDEVPGL DMRRWRVALN GAEPVSAVGV ERFLDHFAPA GFAPTAMFPV YGMAEATLAV AFPPLGRAPV VTWVDRDRLA AEGIVTEVPR EHPRAKGLVA VGRPVRDIRI RIADLHGDVL ADPLGDGLAP SLRVGEIQIR GGSVTSGYLT AGGLTTGGFT ADGWLRTGDL GFQRGDDLFV TGRDKEMIII RGVNYYPEDA EAAVRDLPGV HRRRVVAFGS PDQPDAAGSP PDATGAKAAG GVTVVGETAL TEPADRARLA TDLRMAATAA LGLSTVTVRL VEPGALPRTS SGKFQRLAVR DLVGRGVL
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