Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1903 |
Symbol | |
ID | 3906852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2236362 |
End bp | 2236877 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637879241 |
Product | hypothetical protein |
Protein accession | YP_481008 |
Protein GI | 86740608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00831928 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGCT ACGTGTTCGA ATCCCCGGAA AGGTTCGTGG TGGGAACCGT CGGCCAGCCG GGTGACCGGG TCTTCTTCCT GCAGGCTGCC GGGCGTGGTC AGGTCGTGAC GGTCGGTCTG GAGAAAACCG AGGTCACCGC CCTCGCGGAG GGGCTGACCG CGTTGCTCGG CCAGGTGGGC CAGACCCAGG GCATCGTGCT TCCGACCGCT TCGGACGTCG AGATCGATCT TGCCCCGCTG GATGCCCCGT TCGAGGAGGA CTTCCATCTG GGCCAGCTCA CGGTGTCCTG GGACGGCCAT CGGGTCTTCG TCGAGGCGGC CGGGCTGTCT CCCGGGGAGT TCCGGCTCCC CGAGAGCGAG GACGAGCTCG ACTCGTTGCG GGTGGGACTG TCGATCAAAC AGGCCCGTGC CTTCATCGAA CGGGCCCGCA CGATCGTCGC CGCCGGGCGT CCACCGTGCG TCCTGTGCGG TCGCCCGGAC GATCCGGCCG GGCACTTCTG CCCTCGGCTG AACTGA
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Protein sequence | MRRYVFESPE RFVVGTVGQP GDRVFFLQAA GRGQVVTVGL EKTEVTALAE GLTALLGQVG QTQGIVLPTA SDVEIDLAPL DAPFEEDFHL GQLTVSWDGH RVFVEAAGLS PGEFRLPESE DELDSLRVGL SIKQARAFIE RARTIVAAGR PPCVLCGRPD DPAGHFCPRL N
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