Gene Francci3_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1903 
Symbol 
ID3906852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2236362 
End bp2236877 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID637879241 
Producthypothetical protein 
Protein accessionYP_481008 
Protein GI86740608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00831928 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCT ACGTGTTCGA ATCCCCGGAA AGGTTCGTGG TGGGAACCGT CGGCCAGCCG 
GGTGACCGGG TCTTCTTCCT GCAGGCTGCC GGGCGTGGTC AGGTCGTGAC GGTCGGTCTG
GAGAAAACCG AGGTCACCGC CCTCGCGGAG GGGCTGACCG CGTTGCTCGG CCAGGTGGGC
CAGACCCAGG GCATCGTGCT TCCGACCGCT TCGGACGTCG AGATCGATCT TGCCCCGCTG
GATGCCCCGT TCGAGGAGGA CTTCCATCTG GGCCAGCTCA CGGTGTCCTG GGACGGCCAT
CGGGTCTTCG TCGAGGCGGC CGGGCTGTCT CCCGGGGAGT TCCGGCTCCC CGAGAGCGAG
GACGAGCTCG ACTCGTTGCG GGTGGGACTG TCGATCAAAC AGGCCCGTGC CTTCATCGAA
CGGGCCCGCA CGATCGTCGC CGCCGGGCGT CCACCGTGCG TCCTGTGCGG TCGCCCGGAC
GATCCGGCCG GGCACTTCTG CCCTCGGCTG AACTGA
 
Protein sequence
MRRYVFESPE RFVVGTVGQP GDRVFFLQAA GRGQVVTVGL EKTEVTALAE GLTALLGQVG 
QTQGIVLPTA SDVEIDLAPL DAPFEEDFHL GQLTVSWDGH RVFVEAAGLS PGEFRLPESE
DELDSLRVGL SIKQARAFIE RARTIVAAGR PPCVLCGRPD DPAGHFCPRL N