Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1892 |
Symbol | |
ID | 3906841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2224562 |
End bp | 2225044 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879230 |
Product | TrkA-like |
Protein accession | YP_480997 |
Protein GI | 86740597 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.30896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.976548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGATCG AGGAGACCGC GCTGCCTGGC ATCGGGCTGC GGCATGACTT CGCGACGCGC AGCGGCCGCC GGCTCGGAGT CGTGTCCCAT CATCACGGGC GCCGGGACCT CGTGATCTAT GACGCGGACG ACCCGGACGC CTCGCGTGAG TCCATCGCGC TGACGCCGGA GGAGGGCGAC GTGCTCTCCG AGCTGCTCGG TGCCCCGCGC ATCGTCGAGA AGCTCGCCGA CCTCAACCGT GCCTTCGCCG GGCTCGTCGG TGAGCAGATC GTGATCCTGC CCGGCTCGCC CTACGTGGGC CGCGAGCTCG GGGACACCCA GGCCCGTACC CGCACCGGCG CCTCCATCGT CGCGGTCGTC CGCGACCAGC AGGTGCTCGC ATCCCCGCGG CCGGACTTCC GATTCGAGGC CGGAGACGTC GTCGTTGTCG TCGGTACGCC GGAGAACACC GCATCCGTCG GTATGTTGCT CCGCAACGGC TGA
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Protein sequence | MEIEETALPG IGLRHDFATR SGRRLGVVSH HHGRRDLVIY DADDPDASRE SIALTPEEGD VLSELLGAPR IVEKLADLNR AFAGLVGEQI VILPGSPYVG RELGDTQART RTGASIVAVV RDQQVLASPR PDFRFEAGDV VVVVGTPENT ASVGMLLRNG
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