| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1889 |
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| Symbol | |
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| ID | 3906838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2221126 |
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| End bp | 2223012 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879227 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_480994 |
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| Protein GI | 86740594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.510271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATCCC TGATCGAGGA CTACGCGCTG ATCGGCGACA CCCACTCCGC GGCGCTCGTG
TCGCGCACCG GGTCGATCGA CTGGCTGTGC CTGCCCCGAT TCGACTCGCC GTCGTGCTTC
GCCGCCCTGC TCGGCGACTC CGAGGCGGGC CACTGGAAGA TCGCTCCCGT CGAGCCGGTC
CTGGGCGTCA GCCGGCGCTA CCGGGGCGAC ACGCTGGTCC TGGAGACGGA CATGACGACC
GCGTCCGGCA CCGTGCGCAT CGTCGACGCG ATGTTTCCCC GCGCAGGCAC GCACACCGTG
CTCCGCCTGG TCGAATGCCT CGAAGGCGCG GTCCACCTGC GATCGGAGAC CCGGTTTCGC
TTCGACTACG GCTCCATCGT GCCGTGGGTC CGCCGGGTGG ACGAGCACAC CATGTCGGCG
GTGGCCGGGC CGGATGCGGT CACCCTGCGG ACGACCGCCC CGATGGAGGG GCACGACATG
GCCACCTACG CCGACTTCCA CGTCGCCGCC GGCCAGTCGG TACCGTTCTC ATTGACCTGG
ACCCCCTCCC ATCAGACTCC CCCGCCGTCC CACGACGTCC GGCGCATGAT CACCCTCACC
GAGGCGTGGT GGTCGGACTG GATGGCGGGC TGCACCTACG ACGGCCAGTG GCAGCCGGCC
GTCCGCCGGT CGCTGATCAC CCTCAAGGCG CTCACCTACG CCCCGACCGG AGGGATCGTC
GCCGCCGTCA CGACCTCGTT GCCGGAGCAC ATCGGCGGCG TGCGCAACTG GGACTACCGG
TACTGCTGGC TTCGGGACGC GACGATCACG CTGCTCGCCC TGCTCGACGC CGGGTTCACC
AGCGAGGCGA CCGCATGGCG GGAGTGGCTG CTGCGCGCGG TCGCCGGTGA CCCCTCCCGG
GTACAGATCA TGTACGGCGT TGCCGGGGAA CGCCGGCTGC CCGAATACGA GATCCCGTGG
CTACCGGGGT ACGAGAACTC CGCCCCGGTG CGGGTCGGCA ACGCCGCCGT CGACCAGTTC
CAGCTCGACG TCTACGGCGA GGTCCTCGAC GCCCTGCATG TCGCGCGGGT CGCGGTCGCC
AACCGTCGCC AGACCGTGCC TGGGCTGGCG CTCCCCGGCG GGCAGACCAT CACCGAGAGC
CATGCGGACG ACTCCTGGCC GCTGCAGACC AAGCTGATGG ACTTCCTCGA GACCGGCTGG
CGGAAGACCG ACGAGGGCAT CTGGGAGGTG CGCGGCCCCC GCCGCCACTT CGTCCACTCG
AAGGTGATGG CCTGGGTCGC GGCCGACCGG GCGGTACGCG GGATCGTTGA GTCCCGGCTA
CCGGGCCCTG TCGACCGCTG GTCGGCGCTG CGGGACGAGA TCCACGCGGA GGTCTGTACC
CGTGGGTTCG ACTCCGAACG CAACACCTTC ACCCAGTTCT ACGGCTCCAA GGAACTCGAC
GCGGCGCTGC TGTACATGCC GCTGGTGGGG TTCCTGCCCG CCACCGACCC CCGCGCCGTG
GGAACAGTCG CCGCCATCGA GCGGGAGCTG ATGGAGGACG GGTTCGTCCT GCGGTATCCG
ACGGCCGAGG ACGGCGCGGT CGACGGACTG CCCGCGGGCG AGGGCGCCTT CCTGGCCTGC
ACCTTCTGGT TGGCCGACAA CTACGCCCTG TCCGGGCGGG TCCACGAGGC TCAGGAACTG
TTCGAACGCC TGCTGTCGTT GCGTAACGAC GTCGGGCTCC TCGCGGAGGA GTACGACCCC
AGGCTGGGCC GGATGACGGG CAACTTCCCG CAGGCGTTCA GCCACGTCCC CCTGGTCAAC
ACCGCGCGGA CGCTCACCGA CGCGCTGCGC GGCACACCGC GCTCGCGCAC CGACCGGGCC
CACCCGCCCG GCCACTTCTT CGGCTGA
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| Protein sequence | MPSLIEDYAL IGDTHSAALV SRTGSIDWLC LPRFDSPSCF AALLGDSEAG HWKIAPVEPV
LGVSRRYRGD TLVLETDMTT ASGTVRIVDA MFPRAGTHTV LRLVECLEGA VHLRSETRFR
FDYGSIVPWV RRVDEHTMSA VAGPDAVTLR TTAPMEGHDM ATYADFHVAA GQSVPFSLTW
TPSHQTPPPS HDVRRMITLT EAWWSDWMAG CTYDGQWQPA VRRSLITLKA LTYAPTGGIV
AAVTTSLPEH IGGVRNWDYR YCWLRDATIT LLALLDAGFT SEATAWREWL LRAVAGDPSR
VQIMYGVAGE RRLPEYEIPW LPGYENSAPV RVGNAAVDQF QLDVYGEVLD ALHVARVAVA
NRRQTVPGLA LPGGQTITES HADDSWPLQT KLMDFLETGW RKTDEGIWEV RGPRRHFVHS
KVMAWVAADR AVRGIVESRL PGPVDRWSAL RDEIHAEVCT RGFDSERNTF TQFYGSKELD
AALLYMPLVG FLPATDPRAV GTVAAIEREL MEDGFVLRYP TAEDGAVDGL PAGEGAFLAC
TFWLADNYAL SGRVHEAQEL FERLLSLRND VGLLAEEYDP RLGRMTGNFP QAFSHVPLVN
TARTLTDALR GTPRSRTDRA HPPGHFFG
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