Gene Francci3_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1885 
Symbol 
ID3906834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2217010 
End bp2217351 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content69% 
IMG OID637879223 
ProductMerR family transcriptional regulator 
Protein accessionYP_480990 
Protein GI86740590 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.375979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG GCGAGCTGTC GACACAAACC GGCGCCAGCG TGCGGTCCTT GCGCCATTAC 
GAGAAGAACG GACTGCTCGT GGCGGAGCGC GGCGCCAACG GCTACCGCCA TTTCCCGGAG
TCCGCGGTGG AGACGGTGGC CCGGATCCAG GTGCTGCTCG GCGCCGGACT GTCGGTGGCG
ACGATCCGCC AGGTGCTGCC CTGCACCATC GACGCGACGC CGCGGATCGT GCCGTGTGCC
CAGCTGTCGG CGACACTGCG CCGCGAGCTG GACCGGCTGG AGCTACAGGC CGCGTACCTC
GATCGCGCAC GTTTCCTGAT CTCGACGATG CTCGCGGCCT GA
 
Protein sequence
MLIGELSTQT GASVRSLRHY EKNGLLVAER GANGYRHFPE SAVETVARIQ VLLGAGLSVA 
TIRQVLPCTI DATPRIVPCA QLSATLRREL DRLELQAAYL DRARFLISTM LAA