Gene Francci3_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1836 
Symbol 
ID3906227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2171511 
End bp2172314 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content71% 
IMG OID637879174 
Producthypothetical protein 
Protein accessionYP_480941 
Protein GI86740541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGG AGACGTTCGC CCCAACGGCG CCCGAGGGCC CGAACGTGGC CAGGGTCTAC 
GACTACTTCC TCGGCGGGGC ACACAACTTC CCCGCCGATC GGGAAGCCGC GGCGCGGGTC
ATCGAGACGT GGCCGCAGAT CCGAGACACC ACCCGGGTCA ACCGTCTGTT CCTCGGTGAA
GCAGTCCGCT TTCTCGCCGG CGAGGTCGGC CTTCGCCAGT TCCTCGACAT TGGCTCCGGC
ATGCCGACGA TGGGCAACGT CCACGAGGTC GCCCAACAGG TCACGCCGGA CGCCTGCGTC
GCCTACGTGG ACCACGACCC CGTCGCGGTC GCGCACAGCC AGATCCTGCT CGCGTCCAAT
CCAAAGGCGC TGGCGGTGGA AGCCGACTTG GCCCGGCCCG AGGAGATCCT GACCCACCCG
GAGATCACCG GCCTGCTGGA CCTGTCCCAG CCGGTCGGGC TCCTGCTCGT GGCGATCCTG
CACTTCTTCC CCGACGACAC CGACCCGCAA CGGCTGGTCG CCTCTCTGCG CGACGCCCTT
CCGGCGGGCA GTTACCTGGT CTTGACCCAC GCCACCGGCG ACGGGCAGGG CAGGGACGTC
GCGGACGCGG CCGAGGTGTA CCGGCGCACG ACCGCGCCGT TCCAGCTGCG CGACCGGGAC
CAGGTGACGG GGTTCTTCGA CGGCACCGAG CTGGTCGAGC CCGGCGTGGT CCTGCTCCCG
GGCTGGGAGG ACGACCGGCA GCGCCGGGCG ACGACGGCCG CCGGACGGCT GCCGGTCTAC
GCCGGCGTCG GTCGTATCCG ATGA
 
Protein sequence
MEPETFAPTA PEGPNVARVY DYFLGGAHNF PADREAAARV IETWPQIRDT TRVNRLFLGE 
AVRFLAGEVG LRQFLDIGSG MPTMGNVHEV AQQVTPDACV AYVDHDPVAV AHSQILLASN
PKALAVEADL ARPEEILTHP EITGLLDLSQ PVGLLLVAIL HFFPDDTDPQ RLVASLRDAL
PAGSYLVLTH ATGDGQGRDV ADAAEVYRRT TAPFQLRDRD QVTGFFDGTE LVEPGVVLLP
GWEDDRQRRA TTAAGRLPVY AGVGRIR