| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1780 |
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| Symbol | |
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| ID | 3904010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2116949 |
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| End bp | 2117827 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637879118 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_480885 |
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| Protein GI | 86740485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.154146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCAC GATCGGGGCC AACGGTTCGA CGACGCAGGC TCGGGGTCGA GCTGCGCCGC
CTGCGCGAAG CGGCCGGGCT CACCGCCGCC GAGGCGGCCA AGGCGATCCG CGGGTCGGAG
GCGAAGATCA GCCGGATGGA GAACGGGCTC GTCTCGTTCC GGGCGATCGA CGTCAGTGAT
CTTCTGCACG CCTACGGCAT CACCGACGAC GCCCGACGTG AGGCGGTCCT CGCGCTGGCC
AAGGAGACCC GGCAGCAGGG CTGGTGGCAC ACCTACGGGG ATGTGGTTCC GCGCTGGTTC
GAGGTGTATG TCGGGCTCGA AGCCGAGGCG AGCCACATCG CGACATTCGA GATGTTGCTC
GTTCCCGGGC TACTCCAGAC CGCCGACTAC GCCCGCGCGG TGATGCAGGC CGCCACGCCG
CTGCTGGCTG ATGCGGAGAT CGATCGTGCC GTGGATCTCC GCCTCGGTCG TCAGAAGGCG
CTGGCCGCCG ACCCACCGCC GCAGCTCTGG GCGATCCTGG ACGAAGCCGC GGTCCGCCGT
GTGGTCGGTG GGCCCACGGT GACACGTGCC CAACTCGCCC ACCTGATCGA GATGTCCCGC
CGTCCCGAGA TCACTATCCA GGTGCTGCCG TTCCGTCTCG GGGCCCACGC GGGCATGGGT
GGATCGTTCA TCCTGCTGGG CTTCCCCGAC GGGGACAACA CACCGGAGAT CGTCTACATC
GATCAGGCGA CCGGCAGCCT GTACCTTGAT CGCCCGGCGG ACGTCAGTCA GTACCGGGAA
CGGATGGATA GGCTGCGGGC ATCAGCCCAC GATGAGGACG CATCACGCCG CCTGATCGTC
GACGCGATGG AAGGTGTTGA CGATGACCAC AACCCGTGA
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| Protein sequence | MAARSGPTVR RRRLGVELRR LREAAGLTAA EAAKAIRGSE AKISRMENGL VSFRAIDVSD
LLHAYGITDD ARREAVLALA KETRQQGWWH TYGDVVPRWF EVYVGLEAEA SHIATFEMLL
VPGLLQTADY ARAVMQAATP LLADAEIDRA VDLRLGRQKA LAADPPPQLW AILDEAAVRR
VVGGPTVTRA QLAHLIEMSR RPEITIQVLP FRLGAHAGMG GSFILLGFPD GDNTPEIVYI
DQATGSLYLD RPADVSQYRE RMDRLRASAH DEDASRRLIV DAMEGVDDDH NP
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