Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1779 |
Symbol | |
ID | 3904009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2115961 |
End bp | 2116605 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879117 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_480884 |
Protein GI | 86740484 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.144417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG ACCCGACGCC CATTGTCCGG GTGGCCGTGG CGCACTTCCC ACCCACCGAC GCCGCCGTGA CCGACGTGCG CACGAGCACG GTTCGCACGC TGACCGCATG GTTCGTGAGC CGCGCCGCAG TCTCGATCAC CGAAGCCGTC GCCTGTGAAC TGGCGTCCAA TGCCGTCAAG GCCAGCCACC CGCGCGACGT GGTGGCGATA CGGCTCACCG CCGCGAGCGG ACACGTGCTC GTCGAAGTGT GGGATAGCAG CGAGGTGGGT CCGCAGCTCA CCAGCCCCGA CGCCTTCGAC GAGCACGGAC GCGGTCTCAC CCTTGTCGAT GCGCTGAGCA CCCGATGGGG ATGGTTCCGG GCGCGTACCG GCGGAAAGGT CGTCTGGGCG CAGATTCCGG GTGGATTGCG CCCGACGACG GCCATCACGG CTCCGGTGAT GCCGACACGA ACGCCGGTGG CAGGGCCGCA ACCGGTGGAA CCGGTGGCCT ACCGCACCGA CCAGCAAACC CTGCGGCGGG TCGCGGACGC GCTGCGCGCT CTGGACCCCT GGCAGCACCC CCGCCGACCC GAGGCGGTCA CCTCTGGCCA GCACCTCGCA GCCCAGAGAA GGAAGCGGGG ATCAGGCCTG CGGACCGTCC CATGA
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Protein sequence | MSGDPTPIVR VAVAHFPPTD AAVTDVRTST VRTLTAWFVS RAAVSITEAV ACELASNAVK ASHPRDVVAI RLTAASGHVL VEVWDSSEVG PQLTSPDAFD EHGRGLTLVD ALSTRWGWFR ARTGGKVVWA QIPGGLRPTT AITAPVMPTR TPVAGPQPVE PVAYRTDQQT LRRVADALRA LDPWQHPRRP EAVTSGQHLA AQRRKRGSGL RTVP
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