| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1772 |
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| Symbol | |
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| ID | 3904002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2107934 |
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| End bp | 2109397 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637879110 |
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| Product | major facilitator transporter |
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| Protein accession | YP_480877 |
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| Protein GI | 86740477 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.819492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.422548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATA AGAGGGGGAG TCGGGCGATT CGCGGCGGGC GCGACCTTGA CGCTGATAAA
TCCAGCCCGA CTGGTGCGCT CCTTCTGCTG AACATCCAAC ACCTGCTGAT CGCGATGGAC
TTCACCGTCG TCTTCGTGGC GCTGCCAACA ATGGGGGACG ACCTCGGTCT CACTGATCGT
GGGCTGACCT ACGTCACCGC GACTTACGGG CTGGCCTTCG CTGCGTTCCT GCTGTTGGGT
GGCCGAGCCG CGGACGTGTT CGGGCGGCGC CGGGTGCTCT TGGTGGGACT CGCGCTATTC
GTCGTCGCCT CGGTAGTCGC GGTGTCAGGC TCGGCCGCCG CGTTGCTGGT TGGCCGCAGC
ATGCAGGGTG CCGCCGCGGG CCTCATCACC CCGGCCGCCC AAGCCTTGGT CGTCACGCGA
TACCCCGAGG GGAAACAGCG TACGAGGGCG CTGAGTTGGT GGGGTGTCAC CGGTGCGGGC
GGCCTGGCCC TGGGGGGACC GGCCGCAGGG GTACTGACCT GGGCACTGGA CTGGCGGGCT
GTCCTGCTGG TCAATGTCCC GATTGGGTTG CTGTGCTTGG TCTTGGCGCC ACGGCTGATC
GCCGTCGACG CGACCAGGGA GACCGAGGCT GGGCCCCGGT TCCGTCTTCC CGCGGTCCTA
ACGGCAGGCG CGGCGATGGG TCTTCTGGTA TGGACGGTCG CCGAGGGTCC GGTCTCTGCC
GCTGCGGATA CCCTGGTCCG GGCAACGGCC GTAGTGGTGC TACTGGGAGC ATTCGTGCTT
ATGGAGCGGC GGAGCACAGA TCGGCTGATG CACCGCGATA TCTTGCGCGT CCGTCCGGTG
GCTGTCGCCG ACCTGATGTC GGTGTTTTTC GGTGCCGCCC TCGGAGGGCA GTTCTTCGCT
ATCACCCTGT ATCTGCAGGC AGTGAGCGGA ATGTCCGCGC TCGTCGCCGG ACTGATGTTT
ATTCCGGTTA CGCTTTTCAT GGTCGTAGGC AACAAGGTCG GAGTCCTGCT GATCGCTAGA
ATCGGCCCCA TCCGCAGCCT GCCTGTCGGG CTGGCAATTG CTGCGGTGGC CGAGGTGGCG
ATGGCGTTCT TGCCCACCGG TGGTGGCGTG CCGTTGCTGG TTCCCGCGAT GATCCTGCTC
GGTCTGGGCC AGGGCATCGC GTTCGTCGCG ATCACCGTTG CTGCCACGGC CACCGTCGCA
GCTGAGCGGC AGGGTGTTGC GTCCGGACTA CTCAACGTTG GCATGAACAT TGGGCAGTCG
ATCGGTCCCG CCGTGCTCGC CGCGATTGTC ACCTGGCGGT CCACTGCCGC CCTCGACGGC
GGGGCGGGCC AGGCCGAGGC GAACAACCAG GGTTTGCACG GCGCTTTTCT GGCCATCGCC
GCGATCGTGG TCGTGGGACT GCTGGTGTGC GGGGTGCTGC TGCGGTCGGG ACCGGGCCGA
GTCGAATCGG TCCACGCAGG CTGA
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| Protein sequence | MVNKRGSRAI RGGRDLDADK SSPTGALLLL NIQHLLIAMD FTVVFVALPT MGDDLGLTDR
GLTYVTATYG LAFAAFLLLG GRAADVFGRR RVLLVGLALF VVASVVAVSG SAAALLVGRS
MQGAAAGLIT PAAQALVVTR YPEGKQRTRA LSWWGVTGAG GLALGGPAAG VLTWALDWRA
VLLVNVPIGL LCLVLAPRLI AVDATRETEA GPRFRLPAVL TAGAAMGLLV WTVAEGPVSA
AADTLVRATA VVVLLGAFVL MERRSTDRLM HRDILRVRPV AVADLMSVFF GAALGGQFFA
ITLYLQAVSG MSALVAGLMF IPVTLFMVVG NKVGVLLIAR IGPIRSLPVG LAIAAVAEVA
MAFLPTGGGV PLLVPAMILL GLGQGIAFVA ITVAATATVA AERQGVASGL LNVGMNIGQS
IGPAVLAAIV TWRSTAALDG GAGQAEANNQ GLHGAFLAIA AIVVVGLLVC GVLLRSGPGR
VESVHAG
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