Gene Francci3_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1770 
Symbol 
ID3904000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2105701 
End bp2106699 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID637879108 
Productadenosine deaminase 
Protein accessionYP_480875 
Protein GI86740475 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.39004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTATTT TCCACCAGTC GCTTTCGGAA CGCGGATCCG ATGCCGTGAA CCGGTGCGAA 
CTGCACTGCC ATCTCGACGG CTCGGTCCGG CTGAACACAC TGGCCAACAT GGCCGCAGCA
GCACGACTGA CCCTCGTCGC GCCCATCGAG CGTCTGGCCG TCGCACCGGA GGACGTGGGA
GATCTGCCCT CCTTCCTGAC ATACATCGAC ATTGCCCTGG ACGTGCTGCA GACCCCGGAT
GCGCTGCGCC GGACCGCCGC TGAACTGGTC GCGGACTGGG CCGCCGATGG GGTCGACTAT
GGTGAAGCCC GCTTCGCTCC GCAGCTGCAC ACCCGCGCGG ACATGGCGAT CGACGATGCG
ATTATCGCGG TGGCCGACGG CTTGGCGGAG GGAACGCGCG CACATGGAGT CGGCTCCGCG
CTGATCGTAT GTTGCCTACG CCAGCAGTCT CCGGAGATCA GTCTCATGGT CGCCGACGCC
GCCGCGCGGC TACGGCACGT CGTCGCTGGT CTGGATCTGG CGGGCGACGA GCGGGTCCTT
GGCGCGCGAC ACGTCGAGGC ATTCAACCTG GCGCACAGCC AAGGTATCCC GGTGACCGTT
CACGCGGGCG AGGCGGTCGG TCCCGAGAGC GTGTGGGAAG CGTTGGACGT GCTCGGCGCC
TGGCGTATCG GGCATGGGGT ACGCAGCGTC GAGGAAGCGG CGCTACTGGA TCGTCTGCGC
CGGGATCAGA TCGTGCTGGA AACTTGTCCA CGCTCCAATG TGCTGACGCG GGCCGTGCCC
GCGCTGGCGG CACATCCAGT GGCGCGTTTC CTGAACGAGG ACATCCGCGC AACGGTCAAC
ACCGACGCGC GCACCACCGC TGCTACCACT CTCACCGCCG AGCTGGATTC GCTCGCCCGG
GAGTTCGGCT GGAGCGATGA CGAACCCGAA CTGCTATGCC GCAACGCCGC CAAGGGCGCC
TTCGGTCCGC TGCTACCGAC ATGGCCGAAA GTCTCATAA
 
Protein sequence
MPIFHQSLSE RGSDAVNRCE LHCHLDGSVR LNTLANMAAA ARLTLVAPIE RLAVAPEDVG 
DLPSFLTYID IALDVLQTPD ALRRTAAELV ADWAADGVDY GEARFAPQLH TRADMAIDDA
IIAVADGLAE GTRAHGVGSA LIVCCLRQQS PEISLMVADA AARLRHVVAG LDLAGDERVL
GARHVEAFNL AHSQGIPVTV HAGEAVGPES VWEALDVLGA WRIGHGVRSV EEAALLDRLR
RDQIVLETCP RSNVLTRAVP ALAAHPVARF LNEDIRATVN TDARTTAATT LTAELDSLAR
EFGWSDDEPE LLCRNAAKGA FGPLLPTWPK VS