| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1755 |
|---|
| Symbol | |
|---|
| ID | 3906821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2086421 |
|---|
| End bp | 2086855 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637879093 |
|---|
| Product | putative 6-pyruvoyl tetrahydropterin synthase |
|---|
| Protein accession | YP_480860 |
|---|
| Protein GI | 86740460 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
|---|
| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.775446 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTTCGT GCGCGAACTG GTTCGCCGCA CTCGCGGTCG GACTCGCGTG GAAAGGACAG
CCCGTGTTCG CCATACGCAA GGAATTCGGC TTCTCGGCGA GCCACGTCCT CGATCACCTG
CCCGCCGATC ACCCGTGTTC GCGGATGCAC GGGCACAACT ACACCGTGGT CTTGGAGCTA
AAGGCGCAGG AATCCGGCCT CAACGAGGCC GGATTCGTGC GAGACTACCG CGACCTCGGA
GAGTTCAAAG CATGGACGGA TGACACCCTC GACCACCGAC ACCTCAATGA CGTCATCATT
GATCTCAACC CATCCGCCGA GCAACTAGCC CGCTGGATCT TTACGACATG GCGAGAGAAG
CTGCCCGAGC TGGTGGCCGT CTCAGTAAGC GAAACCCCCA AGACCTGGGC AGAGTTCCGG
CCAAGGGTTG ACTGA
|
|---|
| Protein sequence | MGSCANWFAA LAVGLAWKGQ PVFAIRKEFG FSASHVLDHL PADHPCSRMH GHNYTVVLEL
KAQESGLNEA GFVRDYRDLG EFKAWTDDTL DHRHLNDVII DLNPSAEQLA RWIFTTWREK
LPELVAVSVS ETPKTWAEFR PRVD
|
|---|
| |