Gene Francci3_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1753 
Symbol 
ID3906819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2084720 
End bp2085475 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID637879091 
Productradical SAM family protein 
Protein accessionYP_480858 
Protein GI86740458 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.55771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA AGGAATCCTG CCGCCCAAAC ACCAGTCCCA CCGGGCACGA CGTTCTAGTG 
GTTAACGAGA TCTTCGGTCC GACCGTGCAG GGCGAGGGCC CGTCAACGGG ACGGCGATGC
GTCTTCCTGC GCCTGGGTGG GTGCAACCTG ACCTGCTCCT GGTGCGACAC ACCATACACC
TGGGACTGGT GGGGCGTCAG CGACACCGGT AGACGCTTCG ACCCCGGCCG CGAGCTGCAC
GCGATGTCCG CCGCCCAGGT CGGTGACCGG CTACGCGGGC TTGGCTCGGG CCTGGTGGTG
ATCTCCGGCG GTGAGCCGCT GTCACAGCAG CGCAGGTTGC TGGGGCTGGT GACCGGACTC
GTCGACGACG GAATCGAGGT GGAGATAGAG ACCAACGGGA CCGTGGCGCC GTTGGAGGAG
CTGGCGGAGT CGGGGGTGGC CTTCAACGTC TCCGTCAAGC TCGCCCACTC CGGCGTGGCC
GAGCCGCGAC GGCTGGTCCC TGAGGCGCTG GCCGCGTTCG CGGGTAACCC GTCCGCCCGG
TTCAAATTCG TGTGCGCCGA CCGCGACGAC CTGGACGAGG TCGGCACGTT GGTGGACCGG
TTCAACCTGG CCCCGGTGTG GATCATGCCG AAAGGCGCCA CTCCCAGTGC CGTGCTCACC
GGTCTCGCCA TGCTGACCGA TGCCGCAGTG GCCAGGGGGT GGAACGTCTG CACCCGGTTG
CACGTGCTGG TGTGGGGTGA CGAACGCGGG CGCTGA
 
Protein sequence
MTAKESCRPN TSPTGHDVLV VNEIFGPTVQ GEGPSTGRRC VFLRLGGCNL TCSWCDTPYT 
WDWWGVSDTG RRFDPGRELH AMSAAQVGDR LRGLGSGLVV ISGGEPLSQQ RRLLGLVTGL
VDDGIEVEIE TNGTVAPLEE LAESGVAFNV SVKLAHSGVA EPRRLVPEAL AAFAGNPSAR
FKFVCADRDD LDEVGTLVDR FNLAPVWIMP KGATPSAVLT GLAMLTDAAV ARGWNVCTRL
HVLVWGDERG R