Gene Francci3_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1731 
Symbol 
ID3906797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2066904 
End bp2067335 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content73% 
IMG OID637879069 
Producthypothetical protein 
Protein accessionYP_480836 
Protein GI86740436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000472333 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0606167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCC GACGGCCCGA TCGCCGCGGG CGGGACGAGG GAACGGTGAC CGCGTTCGTC 
GTGGTGCTGT TCGCCGCGTT CGTCATGTTC GGCGGGCTGA TCGTCGACGC CGGCGGCGCA
CTCGCCGACA AGACAGAGGC CATGGGAATC GCGCAGGAAG CCGCCCGCGC CGGTGCCCAG
CAGCTCGATC TCACCGTGCT GCGTCAGGGC GGCACGGTCC GGCTGCTGCC GGACCAGGCG
GTCGCCGCCG CCCAGTCCTA CCTCGCCCAG GCCGGTGCCA CCGGCACCGT GACCATCGTC
GACAACACGG TCACCGTCAC CGTCACCGCC GTGCACGACA ACCTGCTGCT CGGCGTCGTC
GGGCTCGACA CCCTCACGGT CACCGCAACC GGCAGCGCCC ACCCGGCCCC ACCGGTCGGA
GCCGTCCCGT GA
 
Protein sequence
MSRRRPDRRG RDEGTVTAFV VVLFAAFVMF GGLIVDAGGA LADKTEAMGI AQEAARAGAQ 
QLDLTVLRQG GTVRLLPDQA VAAAQSYLAQ AGATGTVTIV DNTVTVTVTA VHDNLLLGVV
GLDTLTVTAT GSAHPAPPVG AVP