Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1699 |
Symbol | |
ID | 3903276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2040073 |
End bp | 2040555 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879037 |
Product | hypothetical protein |
Protein accession | YP_480804 |
Protein GI | 86740404 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.141511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0018329 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAACGACG CCACCTGGAG CCTGGTGACC GACGTCGTGG ACCGCGTCCA GCAGTCCATC CGGATGACCG ACTATCCGGC GATCGTCATC CTCGACGGGG ACCGCCGCCA GATCCTGTCC GACTATGACT ACGTCCAGAG TGAGACCGCT CGGACCGGCT TCGAGACCCG TGCGGCCGAG CTCGCCCGCA CCCTGCACGC CCGCCGGTTC ACCTTCGCCG TCCCGCAGAT CATCGAGACG GTCCCTGGCA GCCTCGAAGC CCACGCGTTC TCCGTCCGGC CCCTGCGTGA CGGCGAGCAG GAGAGCGTGG TCTGGACGGC CTACGACGCC GACGACGGCG TCGACTACGG CTGGGCCCCC TACACCCGCC GGCCAGGCGG CCAGCCCGTC TTCGACGAGC CCACCACGTT TCACCTGCGG GCCCTGTCCA CCGACGGCTT CCCCGGCGTC CGTCTGCTCC GCCTTCTCAC CGACGACGAG TAG
|
Protein sequence | MNDATWSLVT DVVDRVQQSI RMTDYPAIVI LDGDRRQILS DYDYVQSETA RTGFETRAAE LARTLHARRF TFAVPQIIET VPGSLEAHAF SVRPLRDGEQ ESVVWTAYDA DDGVDYGWAP YTRRPGGQPV FDEPTTFHLR ALSTDGFPGV RLLRLLTDDE
|
| |