Gene Francci3_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1666 
Symbol 
ID3903053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2000138 
End bp2000587 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content71% 
IMG OID637879004 
Producthypothetical protein 
Protein accessionYP_480771 
Protein GI86740371 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.470727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CGGTGACCGA GACGCGCTCG GCCGCGACGG GAGAAACCGC CGAGGCGGCG 
GATCAGCCCG CCGGGGTCCC GAAGCCGGTG CTGGACCCGG ACCCGACGGG ACCGGACGCC
CCGCCGGAGC TCGCCAGCTT CGAGGACATC GAGGAGGCGA TGCGCGACGT CGTCGACCCG
GAACTCGGCA TCAACGTCGT CGACCTCGGC CTCGTCTACG GCATCCACGT CGCCGACGAC
AACACCGTCA CCCTCGACAT GACGCTGACC TCGGCGGCCT GCCCGCTCAC CGACGTCATC
GAGGACCAGA CCCGCTCCGC CCTGGTCGAC GGCCCGGACG GGCTGGCCGC GGACGTGACC
ATCAACTGGG TCTGGATGCC GCCGTGGGGG CCGGACAAGA TCACCGACGA CGGTCGCGAG
CAGCTGCGCG CGCTCGGCTT CAACGTCTGA
 
Protein sequence
MSETVTETRS AATGETAEAA DQPAGVPKPV LDPDPTGPDA PPELASFEDI EEAMRDVVDP 
ELGINVVDLG LVYGIHVADD NTVTLDMTLT SAACPLTDVI EDQTRSALVD GPDGLAADVT
INWVWMPPWG PDKITDDGRE QLRALGFNV