Gene Francci3_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1662 
Symbol 
ID3903049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1997121 
End bp1997498 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content72% 
IMG OID637879000 
ProductRieske (2Fe-2S) protein 
Protein accessionYP_480767 
Protein GI86740367 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.282248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG CGACCGGCGG TTCTGCCGCG GGCGGCTCCT CGGTCGCCCC GCGGTGGCAC 
CGGGTGTGTG CCGCCGCGGA CCTCGCCGAG GGCACCGCGA TCGGCACCGA GATCGAGGGC
GTGCCGGTGT GCGTGGTGCG GTCGGGCGGG GCGGTCTACG CCGTGCGTGA CGAGTGCTCG
CACGCCGACG TGATGCTCTC CCAGGGCGAG GCCGAGGACG GCAAGATCGA GTGCTGGCTG
CACGGGTCCC AGTTCGACCT GGCCAGCGGC GTCCCGCTGA GCCTGCCGGC GATTGAGCCG
GTGCCCACGT ACGCAGTGAC CATCGACGGC GACGACGTGC TCGTCGACGT CACACATTCG
AACCCGGAAC GAGGGTGA
 
Protein sequence
MTTATGGSAA GGSSVAPRWH RVCAAADLAE GTAIGTEIEG VPVCVVRSGG AVYAVRDECS 
HADVMLSQGE AEDGKIECWL HGSQFDLASG VPLSLPAIEP VPTYAVTIDG DDVLVDVTHS
NPERG