Gene Francci3_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1609 
Symbol 
ID3903744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1930426 
End bp1931622 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content75% 
IMG OID637878946 
Productchromate transporter 
Protein accessionYP_480714 
Protein GI86740314 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.79904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCG TGGAGCTCGA TGCGCCGTCC GCGGCCACCC CCGCTCACCC GAGCCTGCTC 
GCCGTGTTAC GGGAATGGGG CCGGATCGGC TGCCTCGGCT TCGGCGGCCC GCCGACGCAC
ATCGCGCTGC TGCGCCAGCT CTGCGTGGAG CGACGGCGGT GGCTGACCGC CACCGAATTC
GAAGACGCCG TAGCGGTCTG TAACCTGTTG CCCGGACCGG CGTCCACCCA GCTGGCGATC
TACTGCGCTT GGCGGCTCCG GGGCCGGCCG GGTGCGCTCG TTGGCGGGAT CGCGTTCATC
GTGCCAGGTC TGATCCTGAT TCTCGCGCTG GCGGCGATCT TCCTCGCCGG CTCGCCGCCG
CGGTGGGTGC GCGCCGCCGG CGCCGGGGCG GGTTCCGCGG TCGCGGCCGT CGCCGTCCAG
ACCGGCGTCG CGTTGCTGCC GGCAAGCTGG CGGCGGGCCC GCACGGTCAG CCGCCTGCGC
TGGCCGTGCT ACCTGGCCGC CGGGGCGACG GCTGCCGCCG CTGTCGGCCC GTGGCTGGTG
CTCGTCCTGC TCGGCTGCGG CGCGTTCGAG CTGGCCGCCC GCCGCCACCA TCGGCCCGGC
CGCCAGCCGG GCGCTGCCGC GCCACCCATG CCCCTGCTCG CCGCCGCGGC AACCGGCACC
GGCGGGCTGC TCGCGCTGAT CTGGGTTGCC TTCAAGGTTG GTGCCCTGTC CTACGGCGGC
GGCTTCGTCA TCATCCCGCT GATGCAGACC GACGCGGTCG ACCACTATCA CTGGATGACC
GCCGACCAGT TCCTCAACGC GGTCGCGCTC GGACAGATCA CCCCCGGCCC CGTCGTGCAG
ACCGTCGCCG CCGTCGGGTA CGCGGCAGCC GGGATTGGCG GCGGGCTACT GGCCGCAGCC
GTCGCCTTCG GTCCGTCGTT CGCGTTCATC CTGCTCGGCG GTCCCCACTT CGCCCGGCTG
CGGGCCGAAC CGCGAATCCG CGCCTTCCTC GATGGCGCCG CCCCCGCCGC GGCCGGCGCC
ATCCTCGGCT CCGCCATCCC GCTAGCCGGC GCGCTCGACC GGCCCTGGCA GTATGCCACC
CTCGGCGGCG CCATGATCCT CCTGCTGCCC CTGCGCCGCG GCGTCGTTCT CACCCTGCTC
ATCGCCGCCG CGGTCGGGGT GGTCGTCACC GCCGCCGGCG GGCCTCTCCC TCAATGA
 
Protein sequence
MSTVELDAPS AATPAHPSLL AVLREWGRIG CLGFGGPPTH IALLRQLCVE RRRWLTATEF 
EDAVAVCNLL PGPASTQLAI YCAWRLRGRP GALVGGIAFI VPGLILILAL AAIFLAGSPP
RWVRAAGAGA GSAVAAVAVQ TGVALLPASW RRARTVSRLR WPCYLAAGAT AAAAVGPWLV
LVLLGCGAFE LAARRHHRPG RQPGAAAPPM PLLAAAATGT GGLLALIWVA FKVGALSYGG
GFVIIPLMQT DAVDHYHWMT ADQFLNAVAL GQITPGPVVQ TVAAVGYAAA GIGGGLLAAA
VAFGPSFAFI LLGGPHFARL RAEPRIRAFL DGAAPAAAGA ILGSAIPLAG ALDRPWQYAT
LGGAMILLLP LRRGVVLTLL IAAAVGVVVT AAGGPLPQ