| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1570 |
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| Symbol | |
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| ID | 3904802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1883592 |
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| End bp | 1885085 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878907 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_480675 |
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| Protein GI | 86740275 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.482446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCG GCGCCCGGTG GATGTCGGTG AACCAGGTTG TCGTGCAGGT CACCCGCCTG
CTGGTCCAGG TCGTCCTGGC GCACCTGCTC GAACCGCGGG CGTTCGGTCT CATGACGATG
GCGCTGGTCA TCGTGATGTT CCTCGAAATT CTGCGGGGTT TCGGGACCGG CATGGCGGTC
GTCCAACGAG ACAAGATCAG CGAGCGGCTG CTCAGCAGCG TCTTTTTCCT CAATATCGGG
CTTGGTCTGG TCATCTCGGG CCTGCTGGCG TTGCTGGCGC CCGGCCTGGC CAGCCTGTAC
GGCGACTCGG CGCTGACGCC CGTGCTCCAG GTCCTGGGCC TCGGCCTGCT GCTCGCCAGC
CTCGGTGACC TGCAACAGTG GCTGCTCCGC CGGGAGATGA AGTTCGGTGC CGTCGCCGCG
GCGAACATCA TCGGGACGGC GGCCAACGCG GCCTGCTCGA TCGTGCTCGC TCTGCTGGGC
TACCAGGTGT GGTCACTGGT CATCGGCTAT CTGGTCGGAT TCGGGGTCAC CACCCTCGTC
GCGTGGCTGC AGTCGCCGTG GCGTCCCAGG GCCTCGTTCA GCCCCGCCGA GGTCAGGTCC
GTGCTGCGTT TCAGCGCCAA CCTGAGCGGG TTCAGCGTCT TCAACTTCTT TCTGCTGCAC
GGCGACAAGG TGATTGTCGG GCATTTCCTC GGAGCCCAGC AGTTGGGCTA CTATGGCCTG
GCGCAGCGGG TGCTCATGTA TCCGGTGAGC ACTGTTTCCA CGGCGTTTCA GGAAGTCATG
TTCGCCGGTC TTTCCCGGCT CCAGAACGAT CACTCCGCGA TCCGCCGGGT CTATTTCCGG
TCATGCGCGG TCGCCGCTCT GGTCTGTTTT CCGGTCATGG CTGGACTCAC TGTCGTCGCG
CGCGACGTCG TCCTGGTCGT GCTCGGCGCG CGCTGGGAAC GGCTGGTGCC GCTCATCTGG
CTGCTCGCCC CGATCGGCGG CATCCAGTCG GTGAGTTTCA GCGTCGGAGT CCTCTACAAC
GTGAAGGGAA GAACCGACCT GCTGCTGCGC TGGGGAATCT TCTCCGGCCT GCTGATGCTC
GGCAGCTACT TCGCCGGCCT GCCGTGGGGA ATCAACGGGG TCGCGGCGGC GTACGCCATC
GTGATCGTCC TCCTGCTGCC GCCCGGCTTC GCGATTCCCT TCAGCCTGGT GGACGCGAAG
CCGCGCGAGC TGGTCACCGC GGTCTGGCCG CACGTCGTGG CGACCGCGGG GACCGTCGCC
GTGATGGCCG CCGTCCAGTG GCTCACCCAC GGGTTCCGGC TCGCCCGCCC GGTGTGCCTG
TTGGCGAGCG TGCTGGCTGG TGCCGCGACC TACGTCGTGA TCACGTGGAG GCAACGTCCA
CCCGCGTTGG CGGACCTACT GCAGTGCGTC CGGCGCGCGA GCGCCGGCTC GGGGCAGCCT
GCTTCGGCGT CGTCGCGCAG AGACGGCGCG CTGGGCCCGA CGGCTCACGG GTGA
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| Protein sequence | MASGARWMSV NQVVVQVTRL LVQVVLAHLL EPRAFGLMTM ALVIVMFLEI LRGFGTGMAV
VQRDKISERL LSSVFFLNIG LGLVISGLLA LLAPGLASLY GDSALTPVLQ VLGLGLLLAS
LGDLQQWLLR REMKFGAVAA ANIIGTAANA ACSIVLALLG YQVWSLVIGY LVGFGVTTLV
AWLQSPWRPR ASFSPAEVRS VLRFSANLSG FSVFNFFLLH GDKVIVGHFL GAQQLGYYGL
AQRVLMYPVS TVSTAFQEVM FAGLSRLQND HSAIRRVYFR SCAVAALVCF PVMAGLTVVA
RDVVLVVLGA RWERLVPLIW LLAPIGGIQS VSFSVGVLYN VKGRTDLLLR WGIFSGLLML
GSYFAGLPWG INGVAAAYAI VIVLLLPPGF AIPFSLVDAK PRELVTAVWP HVVATAGTVA
VMAAVQWLTH GFRLARPVCL LASVLAGAAT YVVITWRQRP PALADLLQCV RRASAGSGQP
ASASSRRDGA LGPTAHG
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