| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1566 |
|---|
| Symbol | |
|---|
| ID | 3904798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1878579 |
|---|
| End bp | 1879823 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637878903 |
|---|
| Product | putative sugar nucleotide processing enzyme |
|---|
| Protein accession | YP_480671 |
|---|
| Protein GI | 86740271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.445342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATG TCTGTCTGGT GAGCAACGTC TGTCCGGTGA CCAATGTCTG TCCGGCATGC
CAGGGCACCG CGCTCGAAGA CCTGGTACGT GTTGAGCGTT CGCCGGTGAT GACCGGCGTG
CTGTGGCCGT CGCGGGAAGC CGCCATGACC GCGCAGCGCC GTGCTCTGGA GCTGTCGCTG
TGTGCCGAGT GCGGCACCGT GGTCAATGTC GCGTTCGAGG CCGGCCTCGT CGAGTACGGC
GGCGAGTATG ACAACTCGCT GCACTTCTCG CCCGCCTTCC GGGCGTACGC CGAGGCGTTG
GCGGACCGTC TGATCGTCCG GCATAACCTG GTGGGGCGGG AGGTTGTCGA GATCGGGTCG
GGCAAGGGGG ACTTCCTGCG CCTGTTGTGT GCCCGGGGAC TGTGTGCCGG AACCGGGTAC
GACCCGACCT ACATCGGCCC CGAACGTGCC GACGACGCCG CGGTGACCTT TGTGGTCGAC
CTGTACGGTT CGCGCTATTC CCATCTCCCG GCGGATCTTG TCGTCTGCCG GCACGTCCTC
GAGCACGTGT CCGATCCACT GGGCTTTCTG ACCGATATCC GCAATGCGCT GGGCGGCCGG
GACGCGTCGC TGTATCTCGA GGTGCCCAAC GGCGGCTTCG TCCTCGGCGA GGCGGGGGTG
TGGGACTTCA TCTACCCGCA CGTGTCGTAC TTCTCGCCGG CTGGACTTCG GCGGGTGGTG
AGCGCGGCCG GGTTCACCAT CACCGACGCC GGAACATCCT ACGGTGACCA GTTCCTCTGG
ATCGAGGCCA AGACGGCGCC GACGACCCGT CCGTCCGGTC GGATCGGACC GGCCGCCGGC
GAGGACGTGG TGGCGACGGA CCGCTTCGTG GTCCAGGCCA GAAAGTTCGG TGACGTCTAC
CGGGAGGTTG TCGGGCGCTG GTCCGCGCAT CTCGCCGACC TGGCGACGGA CGCCGATTCC
GCCTGGGACG CGCCGCGTGC GCTGGTCTGG GGCGCGGGGT CCAAGGGGGT GGCATTCCTC
AACGTGTTGG ACGTCGGTTC CGCCGTGCGG GGAGTCGTCG ACCTCAACCC GCGGAAGAGG
GGCCTGTTCG TGCCCGGCAC CGGGCATCCG GTGTTGGCAC CCGAGGACCT GTCGGTGGAG
CGGGTGGGGC GCGTTTTTCT TCCGAATCCG CTGTATCTGG ACGAGGTGCG CGGCCGGTTG
GCGGAACTGG GTGTGCCCGC GGAGGTCGTG CCACTTAGCA GCTGA
|
|---|
| Protein sequence | MSNVCLVSNV CPVTNVCPAC QGTALEDLVR VERSPVMTGV LWPSREAAMT AQRRALELSL
CAECGTVVNV AFEAGLVEYG GEYDNSLHFS PAFRAYAEAL ADRLIVRHNL VGREVVEIGS
GKGDFLRLLC ARGLCAGTGY DPTYIGPERA DDAAVTFVVD LYGSRYSHLP ADLVVCRHVL
EHVSDPLGFL TDIRNALGGR DASLYLEVPN GGFVLGEAGV WDFIYPHVSY FSPAGLRRVV
SAAGFTITDA GTSYGDQFLW IEAKTAPTTR PSGRIGPAAG EDVVATDRFV VQARKFGDVY
REVVGRWSAH LADLATDADS AWDAPRALVW GAGSKGVAFL NVLDVGSAVR GVVDLNPRKR
GLFVPGTGHP VLAPEDLSVE RVGRVFLPNP LYLDEVRGRL AELGVPAEVV PLSS
|
|---|
| |