| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1558 |
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| Symbol | |
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| ID | 3904790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1867985 |
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| End bp | 1869622 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878895 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_480663 |
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| Protein GI | 86740263 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.931439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCAC CGCACCCGCA GAACGACGCC GCCGACCACG CGCGGGTGCT TCCACCCCGG
CTCGACCCGC GGGGATCGGG GTCCGGCCGG TCGGGATCCG GGTCGGCACG CGGCGGACGG
TCGGCTAGGC GTCGCGGGTT GCGGGTCTTC CTGGCCTGCG TGTCCTGCCT CGTGTTCGTG
GCCACGGTGG GGGGCTGGGC CGCGTACTTC TATGTCGACG GCAAGGTCAA CCGGGTCGAC
CTCGGCCTCG GTTCGGGCGG CGACTCCGGC GGGGTGGGGA CCGCGAACTA CCTGCTGGTC
GGGACCGACA GCCGCGCCGG TACCAACGGT AAGTACGGAG ACGCGCCGGG CCAGCGCTCC
GACACGACGA TCCTCGCGCA CCTGACGAAG GATGGGACCA CCACCATGGT CTCCTTCCCC
CGCGACATGT ATGTGCTGAT CCCCGAGTAC ACCGACGGGG CCGGCAAACG TCACAAGGCC
TGGCACGACA AGTTCAACGC CGCGATCTCC GTAGGCGGCC CGTCGCTGTT GGTGCAGACG
GTGCAGAGCC TGACCGGCCT GCAGGTCGAC CACTACATCT CGATGGACCT GGAGGGTTTC
AAGGAGATCA CCGATGCCAT CGGCGGTGTC CAGGTCTGCA TCAAGCCGTC GGACGCGAAA
CCGAGCCGCT ACCAGGACGA CCGCGGGCGG TGGCGGATGA GCACGAACAC CAACGACCCG
ATGAGCGGAT TCGTCGGTGG GCCCGGGACG ATCCAGCTCG GCGGCGACCA GGCCCTGGCC
TTCGTTCGCC AACGCCACGG CCTGCCGGAC GGCGACTTCG ACCGCATCCG CCGGCAGCAG
CAGTTCATCG GCTCGATGTT CCACAAGATC ATGGCAGACG ACACCCTGAC GAACCCGATC
AAGGCCCAGA AGCTGGTATC GGCGGCAGCG AGCGCGCTCA CCCTCGACAA CCACACCAGC
ATCGCCGACC TGCGCAGCCT CGGCACCCGA GTCCGCGGGC TGGCCACCGG GGGCCTCCAG
ATGCAGACCG TGCCCGTCCA CGCGCCGACC CGTGCCGAGG GGGCGATCGA CGACAACGGC
AACATCCGCC TGCACGGAGT CCCGGCCTCC GTGCAGCTCT ACCGGCCGGA CGACCTGCAG
CGCATCGTCG CGCCGATGGG TGGCAAGGCC GAGGGCGCGA GTTCTACCAC CGACGCCGGG
AGCGGGGGGA CCGGTCCGGC GCTCGCTCCC GGCGCCGCCG CCGCGCCCTC CCAGGTCCGG
GTCGCCGTCT ACAACGGCTC GTCGCGGGCC GGACTCGCCT CCAAGGTCAC CGAGCAGCTG
ACTGCCAAGG GCTTCCACGC CCGCAACGCC GGCAACGCCT CGGTCCTCAC CCACGAGACC
TCCCGGGTGC TCTACGCCCC CGGGCAGGAG GCCGAGGCGA ACACCGTCGC CGCGGCGGTG
CCCGGCTCGG TCCTGCTCGC CGATGCGAGC ATCACCGGTG TCCAGCTCGT CCTGGGCTCC
GGCTTCACCG CGGTGGTGAC GCCGAGTGTG ACGGCCGGTG GGACCGCGCC TGCGCCCGCA
CCGGCGGCGG CCGGACCCGC CGCCGGACCG GCGCCGCCGG GAGCGCCCTC GCCGGGCCCG
CCCACCTGCA CCTACTGA
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| Protein sequence | MTAPHPQNDA ADHARVLPPR LDPRGSGSGR SGSGSARGGR SARRRGLRVF LACVSCLVFV
ATVGGWAAYF YVDGKVNRVD LGLGSGGDSG GVGTANYLLV GTDSRAGTNG KYGDAPGQRS
DTTILAHLTK DGTTTMVSFP RDMYVLIPEY TDGAGKRHKA WHDKFNAAIS VGGPSLLVQT
VQSLTGLQVD HYISMDLEGF KEITDAIGGV QVCIKPSDAK PSRYQDDRGR WRMSTNTNDP
MSGFVGGPGT IQLGGDQALA FVRQRHGLPD GDFDRIRRQQ QFIGSMFHKI MADDTLTNPI
KAQKLVSAAA SALTLDNHTS IADLRSLGTR VRGLATGGLQ MQTVPVHAPT RAEGAIDDNG
NIRLHGVPAS VQLYRPDDLQ RIVAPMGGKA EGASSTTDAG SGGTGPALAP GAAAAPSQVR
VAVYNGSSRA GLASKVTEQL TAKGFHARNA GNASVLTHET SRVLYAPGQE AEANTVAAAV
PGSVLLADAS ITGVQLVLGS GFTAVVTPSV TAGGTAPAPA PAAAGPAAGP APPGAPSPGP
PTCTY
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