Gene Francci3_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1545 
Symbol 
ID3904777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1854400 
End bp1854939 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content71% 
IMG OID637878882 
Producthypothetical protein 
Protein accessionYP_480650 
Protein GI86740250 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0980761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC CGAACGCGGG CGCGCCGGCG CTCGTCACCG TGGCTTCACC GACCGATCGG 
ACCGAGCTGG CCATGCCCAC GACGCAGACA CCGACCCAGA CCAGCGGGAC CAGCATCAGG
GTGGCGTTCG CCTTCGACCA TGCCGGTGGC GGGGTGCTGT CCCCCGCAAC CTGCCTGTGG
CTGCTCGGGA ACGAGCAGCT CGGCCGGGTG GCGTTCCGGG CGGATGGGGA GGTCCTCGTG
CTGCCGGTGA ACTACGTGAT GGACGGGGAG GCGGTGGCCT TCCGGACGGC CGTGGGCTCG
AAGCTGACCG CCGCGATCGA GGAGGACGCG GTTGGTTTCG AGGTCGACGG GCGCGATCCG
GCGTCCCGCA GCGGCTGGAG CGTCCTGATC AATGGGAAGG CCGTGTCCGT CACCGACCCG
GGCACGCTGG CCAGGCTTGA GCAGACGGGA CTCAAGCCCT GGGCGGACCG CATCGAGCAT
CCGCACTGGG TACGGATCCT GCCCGAGTCG ATGACCGGCC GGGCCGTCAT CCACTCCTGA
 
Protein sequence
MTPPNAGAPA LVTVASPTDR TELAMPTTQT PTQTSGTSIR VAFAFDHAGG GVLSPATCLW 
LLGNEQLGRV AFRADGEVLV LPVNYVMDGE AVAFRTAVGS KLTAAIEEDA VGFEVDGRDP
ASRSGWSVLI NGKAVSVTDP GTLARLEQTG LKPWADRIEH PHWVRILPES MTGRAVIHS