Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1535 |
Symbol | |
ID | 3905001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1840147 |
End bp | 1843989 |
Gene Length | 3843 bp |
Protein Length | 1280 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637878872 |
Product | ATPase |
Protein accession | YP_480640 |
Protein GI | 86740240 |
COG category | [R] General function prediction only |
COG ID | [COG2251] Predicted nuclease (RecB family) |
TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACAGGT TCGAGGACCG CTGGGTGGTT TCCGCCAGTG ATCTTGTCGA CGTCGTCGAG TGTGGGCATC GCGTCGGGCT TGCGCACGCG CTCGCCGCCG GGCTGGTGAC CGGGGAGACG TCGGAGAACG GGCCGCGCCG GATCGACCGG GTGCGCCTGA CCCCCGCGGA CACCACTGCC GTGCGGCACG GCGAGGCGCA CGAACGACGC TGGCTGGAGC ATCTGCGCCG GTGTTTTGGC GCGGACGGGG TCGTGGCGAT CGAGCGGCCC GCCCCCACGC TCGCCGCCCT GGCCCAGGCC CACGAGCGGA CCCGCCAGGC GTTGGCCGCC GGGGTTCCCG TCGTCTACCA GGGGGCGCTG TTCGACGGCG CGTTCCAGGG GCGCCCCGAC TTCCTCATCG CGGCGCATCT CGACCCGGTC GCCGGCGCAT CGACCGGGCC CGCGGTCGCG GGCCGTTACG AGCCCTACGA CGCCAAGCTC GCCCGGCACG CCAGTCCGGG AGCCGTGCTG CAGCTCGCCG CCTACGCGGC GGCCTTACCG TCGGTGGGCG TACCCGTTCC GCGGTTCATG CATCTGCTGC ATCCCGCGCA GCGGGCCACC GCTCCAGAGC CAGAGCCAGA GCCCGCGCTC GGGGTCGGGG TCGGGGTCGG GGTCGTGCGC ACGTTCCGGG TCGACGATGT CGTGCCGATG GTCGGGCACG CGCGCAGCCG TCTCGCCGAT CGGCTGGCGG CTGCCCCCGC GGTTCCCGAA CCGTCCTGGG CCGAGCCCCG GTCGGCCTGC GCCACCTGCG CGTTCAGCGC GCACTGCGCG CGCGGCCGGG CGGAGGCCCG CGACCTGTCG CTGGTCGCCG GGCTGCGCGG CGACCAGCGA CAGGTGCTGC GCGCGGCCGG CATCACCGCG GTGGAGGAGC TCGCCGCGGC CCGCGACGAC CAGCGGCCCG CGACGATGTC CCCGGCGACG TTCGCGGGAC TGCGTCTTCA GGCGGAACTG CAGGCCGGGC AGGATGCGAC GCGTACCGCG GACGACCCGG TCGGGACGGT GACCGTCCGG ATGACCGGCC CGGAGGGTCT CGCGGCCCTT CCGGTGCCCG ATCCCGGTGA CATCTACTTC GATATGGAGG GCGATCCGTA CGCGCTGGAC GCCGCCGGTC TGGAGTACCT GTTCGGCGCG GTCACCCTCG CGGACGGCGA GCTCTTCCGG GCGTTCTGGG CACACGATCG GGCGGGGGAG CGGCAGGCGT TCGAGCGTTT CGTCGACTGG GCGACGGAGC GGTTGCGCGC GCACCCCGGC GCGCACATCT ACCATTACGC GCCCTACGAG CCGAACGCGT TGCGCCGGCT GGCCGCGCGA CACGGCACGC GGGAACGGCA GGTAGACGAT CTGCTCGCCG GGCACCGGCT GGTGGATCTC TACGCCGTGG TCCGGCGCAG CCTGCGGATC TCCCAGCCGT CCTACTCGAT CAAATACCTC GAACCGCTGT TCCTGCCCGG TGCCCGACAG GCCGAGGTGA AGAACGCCAC CGACAGCATC GTGGCGTACG AGAGCTTCCT GGCACACCGC GCCGCCGGGG AGCTCGCCGC GGCCGACCGC GTCCTCGCTC AGATCGCCGA CTACAACCGG ATCGACTGCG TGTCGACCCA CCGACTGCAC CGCTGGCTAC TGGGCCTGCG GGGGGCCGAC GGCGGCACGC CGCGGATCGA CACCGCTGCC GCCGTTGACA CCGCTGCCGC CGTTGACACC GCTGCCGCCG TTGACACCGC TGCCGCCGTT GACACCGCTG CCGACGCCGC CGACGACGCG CTCGTCGACG CCGCCGACGA CGCGCTCGTC GACGCCGCCG ACGACGCGCT CGTCGACGCC GCCGACGACG CGCTCGTCGA CACCCTCGTC GCGGGCCTTC CCGACGATCC GGCCGACTGG ACGGGAGACG AGCGGGCGCG CGCCCTGCTC GCCGCGGCCG TCGGATACCA CCGGCGTGAG AACAAGCCCG CCTGGTGGTC GTACTTCGCG GCGCTGACCG CCGATCGCGC CACGCTGGAA TCGGCCGACG ACTGCGCGGT CCCGGTGAGC TGGACCGTTG TCGAGGACTG GGTCGAACCG GCCGGGCGAC GGCGGCGGAG TCGTCGACTG CTGCAGGCCC GCGTCGATCC GGACCGTCCG CATCCCTTCG ACCGCGGCGA GGCGGTGCGG CTGCTCTACC CGGGACCGCC CGGGGCCGAG GGCGCCACCA CCGACGCGGT CGTCGAGCGA GCCGAGCCGC ACACGCTGCT GCTGCGGGAG AGCGTCGCCC CCGACGGCGT GGCCCGCAGG CCGCCCCTCG CCGTGCTGCC CGGATCGCCG GTGCGTCCGG AACCCAAGCC GGCGGCGATC CGCGGCCTCG CCCGCCGGAC CGCCGACGCC CTGCCGGACC TGCCCGCGGA CCCCGCGTTG GACCTGCTGC GACGTCGCCC CCCGCGGCTG GTCGGCCGGG ACGACCTGCC GGCGCCCGGC GAGCACGACG GAGACCAGAT CGCCGCCGTG CTCGCCGCGG TGAGCATGCT CGACGGCTCC TACCTGGCCG TGCAGGGGCC GCCGGGGGCG GGCAAGACCT ACCTCGCCGG CAGGCTCATC CGCCATCTCG TCGAGCAGGG GCGCACGGTC GGGGTCTGCT CGACCAGTCA CAAGGCGATC GAGAACGCGA TGCTCGCCGC GACCGGCCAG CCGCCGGCGG ACCCGAAGCC CGCGGACGCC CGGGCCGCGG ACGCCCGGGC CGCGGACGCC CGGGCCGCGG ACGCCCGGGC CGCGGACGCC GTGCCCGCCT GGCGCCCCGC GGTGCCCGCC GCGAAGAAAC AGCGGTCCGG GGCGAGGCCG GCTTCGGCGG CTTCGGGCAT GTTCCCGCCC TGGGATGGTC CGCGGGATCT GCGGGCACTC GCGGCGTGGC GCCGGGAGCA CCCCGAGGGC CACCTGGTCG GGGACACCGC CTGGGCGTTC GCGAACCCGG TGCTGCGTGG TGACCCCTTC GACGTTCTGA TCATCGACGA GGCGGGGCAG TTCGCGCTCG CGGACACCCT CGCGGTGGCT GGCGCGGCCC GCAACCTCGT GCTCCTCGGC GATCCGCAGC AACTGCCGCA GGTGGTGGCC GGCATCCATC CGGACGGCGC GGACGCATCG GCGCTGTCGC ATCTGCTCGG CGACGCCGAG GTGATCCCGC CCGAGTTCGG CTACTTCCTC GACCGGACCC GCCGGCTGCA CCCGGCCGTG TGCGCGCCGG TGTCGGCGCT GGCGTACCGG GGGCTGCTGC ACGCGCATCC GGTGGCCGGG ACGCGCGCCG TGGCGGGTGT GCCGGCCGGG CTGTACCTGC ACGACGTCGA GCATCACGAC AACGGCACCC GGTCGGACGA GGAGGTGGCC GTGATCCGTG ACATCGTTCG CCACCTGCTC GGTCGTACCC TCGTCGACGG CGGGCCCCCG CGCCCGCTCC TCGGCAGTGA CCTGCTCGTC GTCGCCCCCT ACAACCGGCA GGTGCGGGCG GTCGAGCACG CGCTGGGCAA GGCGGGCCTG CCCGGGGTGC GGGTCGGGAC GGTGGACCGT TTCCAGGGCC AGGAGGCAGC CGTCGTCATC ACCTCGCTCA CCACGTCCAG CTCGGCCCAG GCGCCGCGGG GGCTGGACTT CCTGCTCTCC CGCAACCGGC TCAACGTCGC GATCTCCCGG GCCCAGGTGG CGGCGGCGCT GGTCATGTCA CCGGCGCTGC TCGACAGCTC TCCCCGTTCG GTCGCCGAAC TTCAGCTCCT CGCCGGGTTA GCCCGGCTGC GTGTCATGGC CCGAACGGAC CTGCTCGCCG TGCGCTCCCC GATACATTCC TGA
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Protein sequence | MHRFEDRWVV SASDLVDVVE CGHRVGLAHA LAAGLVTGET SENGPRRIDR VRLTPADTTA VRHGEAHERR WLEHLRRCFG ADGVVAIERP APTLAALAQA HERTRQALAA GVPVVYQGAL FDGAFQGRPD FLIAAHLDPV AGASTGPAVA GRYEPYDAKL ARHASPGAVL QLAAYAAALP SVGVPVPRFM HLLHPAQRAT APEPEPEPAL GVGVGVGVVR TFRVDDVVPM VGHARSRLAD RLAAAPAVPE PSWAEPRSAC ATCAFSAHCA RGRAEARDLS LVAGLRGDQR QVLRAAGITA VEELAAARDD QRPATMSPAT FAGLRLQAEL QAGQDATRTA DDPVGTVTVR MTGPEGLAAL PVPDPGDIYF DMEGDPYALD AAGLEYLFGA VTLADGELFR AFWAHDRAGE RQAFERFVDW ATERLRAHPG AHIYHYAPYE PNALRRLAAR HGTRERQVDD LLAGHRLVDL YAVVRRSLRI SQPSYSIKYL EPLFLPGARQ AEVKNATDSI VAYESFLAHR AAGELAAADR VLAQIADYNR IDCVSTHRLH RWLLGLRGAD GGTPRIDTAA AVDTAAAVDT AAAVDTAAAV DTAADAADDA LVDAADDALV DAADDALVDA ADDALVDTLV AGLPDDPADW TGDERARALL AAAVGYHRRE NKPAWWSYFA ALTADRATLE SADDCAVPVS WTVVEDWVEP AGRRRRSRRL LQARVDPDRP HPFDRGEAVR LLYPGPPGAE GATTDAVVER AEPHTLLLRE SVAPDGVARR PPLAVLPGSP VRPEPKPAAI RGLARRTADA LPDLPADPAL DLLRRRPPRL VGRDDLPAPG EHDGDQIAAV LAAVSMLDGS YLAVQGPPGA GKTYLAGRLI RHLVEQGRTV GVCSTSHKAI ENAMLAATGQ PPADPKPADA RAADARAADA RAADARAADA VPAWRPAVPA AKKQRSGARP ASAASGMFPP WDGPRDLRAL AAWRREHPEG HLVGDTAWAF ANPVLRGDPF DVLIIDEAGQ FALADTLAVA GAARNLVLLG DPQQLPQVVA GIHPDGADAS ALSHLLGDAE VIPPEFGYFL DRTRRLHPAV CAPVSALAYR GLLHAHPVAG TRAVAGVPAG LYLHDVEHHD NGTRSDEEVA VIRDIVRHLL GRTLVDGGPP RPLLGSDLLV VAPYNRQVRA VEHALGKAGL PGVRVGTVDR FQGQEAAVVI TSLTTSSSAQ APRGLDFLLS RNRLNVAISR AQVAAALVMS PALLDSSPRS VAELQLLAGL ARLRVMARTD LLAVRSPIHS
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