| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1502 |
|---|
| Symbol | |
|---|
| ID | 3904968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1795659 |
|---|
| End bp | 1796060 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637878839 |
|---|
| Product | PilT protein-like |
|---|
| Protein accession | YP_480607 |
|---|
| Protein GI | 86740207 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCC TGGACACCTC CGCGCTGGTG GAGTTTCTGG TCGGCACGGA TGACGTCGCC
GACGTGGTCC GTGCCCTGGC CACCCGGGAG CGGATCGCCG CGCCGCACGC GGTCGACCTG
GAATGCGCCT CGACGCTGCG CGGCCTCGCC CGCGGTGGGA AGCTGCCCGA GGGCGAAGCA
TCACGTGCCC TGGAACTGCT TGGTCGCATG AACCTGCGAC GCTATGGCCA CGCCCCGCTC
CTCCCCCGGA TCTGGGAACT ACGCCACAAC ATGTGGCCCT ACGATGCCGC CTACATCGCG
CTCGCGGAAA CCCTGAACGC CGACCTTGTC ACGGCCAACC GGAAACTCGA CCGCGTTCCG
GGTCTCCGCT GCACCGTCCG TGACCTCCAG AACGGGCCGT GA
|
|---|
| Protein sequence | MIVLDTSALV EFLVGTDDVA DVVRALATRE RIAAPHAVDL ECASTLRGLA RGGKLPEGEA
SRALELLGRM NLRRYGHAPL LPRIWELRHN MWPYDAAYIA LAETLNADLV TANRKLDRVP
GLRCTVRDLQ NGP
|
|---|
| |