Gene Francci3_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1464 
Symbol 
ID3903101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1757483 
End bp1758385 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content73% 
IMG OID637878802 
Producthypothetical protein 
Protein accessionYP_480570 
Protein GI86740170 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.420029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0366488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATG TGCGAGAACG GACCGGATGG CCACGCCGAG GGCCGGTATG CCCCGGGGCC 
GCCGGCCCTT CGGATCCCTG CGGCGTCTCC GGGCGGCCCC GTCGCCCCTG GCAGCGTCCC
CTCGCCTTGG CCCTCGTCCT CGGCCTGCTC GGCCTGGTGA TCGCGACCGG GGCCCGGCGT
GCCGCGACGA CGGCCGGGGA ACGTGCGGAG CTCGTCGCGG CCCTGCGCGC GAAGATACAT
GAGCGATCCG CCGTGACCAC TGCGGCCGCG ACCCGGGTCG GCGAGCTGCG CCTGCGGGTG
AAGACGGCGC GGGAACAGCG CGCCCGGGCC GAGCGTGAGC TGGCCTGGGC CACGGCGGCG
CTGTCGGATC TCGGGCCGGC GGCAGGCTGG TCCCCCGTGC GTGGACCGGG TGCCCGGATC
GAGCTCGCGG ACCGGACCGC CCCCGGGCCG TCGGCACCGT CGGCACCGTC GGCACCTCGT
GCGTCAACGG CACCCACCCC GCTGCGCCCG TTGACCGGGC TCGCCGGTCC CCACCCCGCA
CCGGCGTCCG GCTGGACCCG GATTCAAGAT CGAGATCTTG CCGATCTCGT CAACGTGCTG
TGGATCTCGG GTGCCGAGGC TGTCGCGGTC AACGGCGTCC GCCTGACGGC TCTCAGCGCT
ATCCGGGCGG CCGGTGATCT CATTCTCGTC GGATTCGTAC CGATGATCGC GCCGTACACC
GTCGAAGCGG TGGGTGATCC GGACGATCTC GTGCGGCGTC TCGAGGAGTC CGCCGTGATC
GACCGGCTGC GGCATCGTCC CGACTCACCG GTGACCTCCC TGTCGGTCGT CACCGTCAGA
AACCTGACCC TGCCCGCGGC CTATCCCCAG GTGCTGCGGC ATGCTCGACG GAGCGAATCA
TGA
 
Protein sequence
MPNVRERTGW PRRGPVCPGA AGPSDPCGVS GRPRRPWQRP LALALVLGLL GLVIATGARR 
AATTAGERAE LVAALRAKIH ERSAVTTAAA TRVGELRLRV KTAREQRARA ERELAWATAA
LSDLGPAAGW SPVRGPGARI ELADRTAPGP SAPSAPSAPR ASTAPTPLRP LTGLAGPHPA
PASGWTRIQD RDLADLVNVL WISGAEAVAV NGVRLTALSA IRAAGDLILV GFVPMIAPYT
VEAVGDPDDL VRRLEESAVI DRLRHRPDSP VTSLSVVTVR NLTLPAAYPQ VLRHARRSES