Gene Francci3_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1428 
Symbol 
ID3903159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1721244 
End bp1721966 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637878765 
Producthypothetical protein 
Protein accessionYP_480534 
Protein GI86740134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0858013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0358095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGCG AGACCGGCTT CGTCACCTGG GGTTGCGACC GGCCGGGGAG TTCACGGATC 
ATGATGAGGA GACCCAGGTT GAAGCTGGCG AAGGGCACCC GGGAGGTCTT CGACGCGGAG
AGCCTGCTCG AGGAGTACCT GGGGCCGCGC AAGCGAGGTC TGCGCTACGC CTACCCGTAC
TACGACGGCC TGGTCACCAA TAGTGATCCG GATCTGCTGT GCACCGGGGA TCTCCTGGCC
CCGTGCCTGC TCGGCGTCCA CGTGGACCTG GATCGGATGC ACACGCTCAC CGCGCTGATG
CCGTTGCTGC AGCGGGCGTT GGACAGGCTT CCTCCCGGCA TCGAGCTCAT CGAGGCCGAC
GAGGTCACCC TCGATCTGGT CGCCGCGCTC TACGACCCCC TCGACGACCC GGACGTCTCC
GACCGGGACG TCAAGGGCTC CCTCATCGCC AAGGTGCTGC ACCGCAAGCG GCCCGCCCTG
GTCCCGTTGT TCGACTCCAA GGTGAGGATC TTCTACCAGC ACGAGGACTG CGTCCCGCCG
TCGCCGCGGG ACGGGCGGTC CTGGCGGCAG TACATGGGCC TGCTCATCCG CGCGATGCAG
TACGACCTGC GGGAGAACGC CGAGGAGTTC CGCCGGCTCG GGGCGCTGGT ACCCGTCGCG
GGTCCCCCGA TCACCCCGCT GCGGATGCTC GACGTCGTGG TGTGGATGAG CAGCGCGGTG
TGA
 
Protein sequence
MRGETGFVTW GCDRPGSSRI MMRRPRLKLA KGTREVFDAE SLLEEYLGPR KRGLRYAYPY 
YDGLVTNSDP DLLCTGDLLA PCLLGVHVDL DRMHTLTALM PLLQRALDRL PPGIELIEAD
EVTLDLVAAL YDPLDDPDVS DRDVKGSLIA KVLHRKRPAL VPLFDSKVRI FYQHEDCVPP
SPRDGRSWRQ YMGLLIRAMQ YDLRENAEEF RRLGALVPVA GPPITPLRML DVVVWMSSAV