Gene Francci3_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1405 
Symbol 
ID3903386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1692243 
End bp1693271 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID637878742 
ProductAAA_3 ATPase associated with various cellular activities 
Protein accessionYP_480511 
Protein GI86740111 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0567323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00186052 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGACCG ACCCTGGTCT TCTGCACTGG CGTGACCCGG TGACCGACAT CGGCCATCTC 
GCCGACGTCA CCAATCGAGT GCGGACCAGC GTCGAGACGG TCATCGACGG CAAGTCCGAG
GCGATCACGA CGGCCCTGGT CGTGCTGCTG TCCGAGGGTC ATCTGCTGAT CGAGGACGTC
CCCGGGGTCG GCAAGACCAT GCTCGCCAAG GCCCTCGCAC GGTCCATCGA TGCCCGGGTG
CGCCGCATCC AGTTCACTCC GGACCTGCTC CCCGGCGACG TCACCGGAGT CAGCATCTAC
AACCAGGGCA CCCGTGACTT CGAGTTCCGT CCCGGCCCGG TGTTCGCCAA CATCGTCGTC
GGCGACGAGA TCAACCGCGC CGAGCCGAAG GCGCAGTCGG CGCTCCTCGA ATGCATGGAA
GAACACCAGG TCACGGTCGA CGGCGTCACC TACCGGCTCG AGTCACCCTT CATGGTGATC
GCGACCCAGA ACCCGGTGGA GATGGAGGGC ACCCGGGCGT TGCCGGAGGC CCAGCGCGAC
CGTTTCACCG CCCGGATCTC GATGGGCTAC CCCTCCCCCG CGGCCGAGCT GGAGATGCTC
GACAGCCACG GCAACGCCAA CCCGCTGGCC GGCATCACCC CGGTCACCGA CGCCGCCGAG
ATCGCCAAGC TGATCGCACT CGTCCGCACG GTGCACGTCT CGCCCGAGGT GCGCCACTAC
ATCGTCGACC TGGTCGGCGG GACCCGCACG CATCCCGAGA TCGCGCTCGG CGCGTCCCCC
CGGGCGGCGC TGCATCTCAT CCGTGCTGCC CGGGCCCGCG CGGCCCTGGA CCAGCGCGGT
TTCGTCCTCC CCGACGACGT TCAGGAGATG GCTGTCCCGG TCATGGCGCA CCGCCTACTG
CTGCACCCCG AGATCATGCT CTCCGGGGAG CCGACGATCG AGGTCGCCGC CCGCATCCTG
ACCGACGTCC TGCGCCGGAT TCCGATCCTT CGCCCCGGTA CGGCACGCCC GACCCGGCAC
GGCCGTTAG
 
Protein sequence
MVTDPGLLHW RDPVTDIGHL ADVTNRVRTS VETVIDGKSE AITTALVVLL SEGHLLIEDV 
PGVGKTMLAK ALARSIDARV RRIQFTPDLL PGDVTGVSIY NQGTRDFEFR PGPVFANIVV
GDEINRAEPK AQSALLECME EHQVTVDGVT YRLESPFMVI ATQNPVEMEG TRALPEAQRD
RFTARISMGY PSPAAELEML DSHGNANPLA GITPVTDAAE IAKLIALVRT VHVSPEVRHY
IVDLVGGTRT HPEIALGASP RAALHLIRAA RARAALDQRG FVLPDDVQEM AVPVMAHRLL
LHPEIMLSGE PTIEVAARIL TDVLRRIPIL RPGTARPTRH GR