| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1401 |
|---|
| Symbol | |
|---|
| ID | 3903382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1686863 |
|---|
| End bp | 1687675 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637878738 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_480507 |
|---|
| Protein GI | 86740107 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.30255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000533063 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC ATGTCACCGG CGCGGATCTG CGGCAGGCCG CGATCTGGCA CGGCCTGCGG
ACGGTCCTGC CCGGATCGGC AGCGGGGGTT CCGGCCTGGT CGGTGGCCCC GACGGCCACA
GCCATCCCGC CGATCATCGT TGACGCGGGC GGTGGGAGTG GTGGCTTCGC CGTACCCCTG
GCGGTCGAGG GCTACCTGGT GATCGTCGTG GACCCGTCGC CGGACGCCCT GGCAGCGTTG
CGCCGTCGCG CCGACGAACG GGGCGTCGCC GACCGGGTCA CGGCCGAGCA GGGCGATCTG
GCCGACCTGA CCGGCATCGT CGGAGCCGAG ACCGCCGATT TGTTGCTGTG CCACTCCGTC
CTCGACGTCG TTGACGATCC CGAGGCCGCG CTGGCGGGGG CCCTGCGGGT GCTGCGCCCG
GGAGGCGTTC TCAGCCTCGT CGTCGCGGGC CGGGCTGCCA CGGTGCTCGC CCGCGCCCTG
GCGGGTCGCT TCGAGCAGGC GCAGGCCGTG CTGACCGGCC AGGGCGCCGG GGCGCCCCGG
ACGCCCGCCG GGTTCACCAC CGCCGAGATC GTCGCGCTGG TGAACGCGGC GGGCGCGGAC
GTCGTCGACG TCCACGGGGT GCGCGTGTTC GCCGACCTGG TCCCCGGGGC GCGGGTCGAC
TCCGATCCCT TCACCGCGCA GCGGCTGCTG CGCCTGGAAC TGGCCGCGGC CGCCCTGGAG
CCGTTCCGTG ACCTCGCGGC ACAGCTGCAC GTGCTTGCCC GCCGTCGTGC CGCTGGTACC
GCTCGCGAAG CCGGCGCCGC CGGGTTCCCG TGA
|
|---|
| Protein sequence | MTSHVTGADL RQAAIWHGLR TVLPGSAAGV PAWSVAPTAT AIPPIIVDAG GGSGGFAVPL
AVEGYLVIVV DPSPDALAAL RRRADERGVA DRVTAEQGDL ADLTGIVGAE TADLLLCHSV
LDVVDDPEAA LAGALRVLRP GGVLSLVVAG RAATVLARAL AGRFEQAQAV LTGQGAGAPR
TPAGFTTAEI VALVNAAGAD VVDVHGVRVF ADLVPGARVD SDPFTAQRLL RLELAAAALE
PFRDLAAQLH VLARRRAAGT AREAGAAGFP
|
|---|
| |