| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1396 |
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| Symbol | |
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| ID | 3903377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1677230 |
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| End bp | 1679914 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878733 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_480502 |
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| Protein GI | 86740102 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.330404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000156595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGATAC CCCGCGAGCA GGCGCCCTGG ACGCAGCCCC CCCGCCGTCG GGTTCTGATC
GCGACACCGG TGAGCGAACG GGTCGCGCGG CTCGTCACTC GGCACGACGC CGCCCGGCTA
CGCCCGGAGC TGGCCACCCG GCCGACGGGC CTGGCCGACG CCCTGGTCGA ACTGCGGCCG
CACACCCTCG TCGTCGGGGT GAACGCGGTG GATGGACCGG CACTCGAACG GTGGGCCACC
GCGGTCCGCA CGGACCCGGC GGAGGCCGGC CGGGACCGAC CCCTGCTGCT GGTCCGCCGG
GGCACCTCCC TCGCTGCCGT CGACCTGGCC GCCGCGGCCC GCCACCGGAT CGAGGTGCGC
AACACCCCCG AGGTCAACGC CCGGCACGTC GCCCGGTTCA TCGTCGACCG GCTGTTCGAC
CCGCTCGGCC ACGCACCCGG CGCCGAGTCG GCCGGGGCCG CCACGCGCAC CGATCGGCCG
GGCGTGCTCG GCCTCGTCGG CGCCGGAAAC ATCAACAGCC GGGTCGCCCG GGAGGGCGTC
GCACGCGGCT GGCACCTGGC CGTGCACGCT CCCTCACTCG CGGCGAGGCC GGCGACGGTC
GCGCTCTGGG CGGCGAAGCA CCGACTGCCG GTAGACCGGA TCCACGTCGC CCGCACCGTC
GAGGACGTCC TCGACGCCGC CGATCTGATC AGCATCGCCG CGCCCCTCGT GCACGACGGG
CCCCGGATAT CCGCGGGCAT GATCGACATG CGGCACGTCA AGTCGTTCAC CGGCCGCCGA
CTCGTGTCGG TCAGCGAACC GCACGTCTTC ACCGACCGGG CGCTGGTCGA CGCCTACGAC
CGCCGCGACC TGGAGGTCGT GATCGACAAC GCCCCCCGGT TCCTCGGCCC GGTCCGCGAG
CTGCTCGCGG GGCGGATCGC CGAGGACGGC GGGGAGCCGC GGCGCGGATT CACTCTCTGC
TCCGTGGCGA TGCACAGTCC CGCCTGCAGC AACGATCTCG ATCAGGCGTT CCTCGCGGTG
GTCGGACGGG CCGACCTGGA CGACCTCACC GGGAACGACC TCACCGGGAA CGACCTCACC
GGGAACGACC TCACCGGGAA CGGCCTCACC GGGAACGGCC CGAAGGACGA TCGTCATGAC
CTGGCCGATC GCCGGGGCGA TCGGCGGGGC ACCGGCCGCC GGGCCGTCGA GGACCCGGCC
TCTGACGGTT CCGCCGTCGA CAAGCACGAC GTGGTGGTCG TCGGCGGCGG GATCGTCGGA
CTCACGATCG CGCTCGTGCT GCGGCTGCGG GGCCACCCCG TCCGGGTCCT CGACGCCGCG
CCTGCCGACC GGGCAGACCC TGCCGCCCAG GGCACGACGT TCGCGGGGAC GAACGGTCGG
CACCTGTCGG CGACCGAGAC CCTGCCGCAG GCGGACGCGA GCCGCGCGGG TGTCCTCGAT
CGCGATCCGA CGCACGGCGG CTGGCGGCTA CGGGACCCGG AGTCGCTGTC GGAGCCGGAG
AGGGCCTGGG CCGGCGCCTT CGAGCAGTGC GCCGACCGTC CCGGGCTGCA CGCGGTGGCC
CGGGACCTGG TGATCGCCCT GAACCGGCTG GGGTTGCGCG GGTGGGAGCA TCTTTTCGCG
CTCGCCGACG GCGGGGACGG GCTCGCTGCC GGGTGCGGGT TGCGCTGGGA CGCCCGCATC
CCGCGGATCT ATCTCGGTCC GGACGACCTC GCCGCGGGCG AGCGGCTGCA GCGGTCCGCG
GGGGGGCGGG TCGTTCGGTT GTCCCGGGCG GACCTGGTTC GCGACTGGCC CGCGCTGGGC
CGCTCGGTCC CGCTGCCCGA CGGCGTCCGG GAGGTGACCG CAGCGGTCGA GGTGGACGGC
TACGCGGTCA ACATCCACGA TCTGGCCACG GTACTCATCG ACCGGCTGCG GGCCGCGGGC
GTCGAGGTGC GCGCCGGCAC CCGGGTGGAA CGCATCGAGA CCGACATCGA GACCGACATC
GAGACCGACA TCGACGGGAA CCTCGACGGG AACCCCGACG GCAACGGGAA CGAGGCCGGG
CACGAAATCG GGAACGGAGC CGGCAGCGGG GTCCGGCTGC ATCTCGCGGA CGGCTCGACC
CTGCGCACCG GCTGGGCCGT GGTGACCGTG GCCGGCCGCG ACCTGCAGCG GCTGCTGGGC
GCCGCCTGGC CCGGCGCCGG TGCCGTCGCG CATCTGCTCG GCCTCTCGCT GACCCTGCCG
AACCCGGGTC TGCGACGGCC GGTGAAGGTC CACGCCGGAG ATCCCCTAGG TGTGATCAAT
GTGACGCTGT CCGCCGATGG TGCCAGGATC CATGTCAGCG GCGGATTCGG GTATCTGGGC
ACCGCCGTGC GGGCGGCCGC GGACAGCGGC GTCGCCCGTC TGCGCGCGGT TTTCGAGCAG
GCGGTCGCCG GCCTGTTCCC GACGCTGCGC CGGCCTGACG GCAGCGTGGA GATGCTCGAC
GTCCGCGTCT GCGAGCGCCC GGCGACCCCG GACGGCCTCC CCCTTGTCGA GGCCGTGGCA
GACCACGGCG GCCGGGTGAT CGTGGCGGCA GGGACGAACG CGGGTGGCAC CGTGCAGGCC
CCGGCGGTGG CCATGCTGGT GGCCGACCTC CTCGCCGGCA CGCCGCGCTG CGCCACGCTC
GCCATGGCCG GTGATCGGGC CGGTCTCCCA CCCATCCGGA GTTAG
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| Protein sequence | MSIPREQAPW TQPPRRRVLI ATPVSERVAR LVTRHDAARL RPELATRPTG LADALVELRP
HTLVVGVNAV DGPALERWAT AVRTDPAEAG RDRPLLLVRR GTSLAAVDLA AAARHRIEVR
NTPEVNARHV ARFIVDRLFD PLGHAPGAES AGAATRTDRP GVLGLVGAGN INSRVAREGV
ARGWHLAVHA PSLAARPATV ALWAAKHRLP VDRIHVARTV EDVLDAADLI SIAAPLVHDG
PRISAGMIDM RHVKSFTGRR LVSVSEPHVF TDRALVDAYD RRDLEVVIDN APRFLGPVRE
LLAGRIAEDG GEPRRGFTLC SVAMHSPACS NDLDQAFLAV VGRADLDDLT GNDLTGNDLT
GNDLTGNGLT GNGPKDDRHD LADRRGDRRG TGRRAVEDPA SDGSAVDKHD VVVVGGGIVG
LTIALVLRLR GHPVRVLDAA PADRADPAAQ GTTFAGTNGR HLSATETLPQ ADASRAGVLD
RDPTHGGWRL RDPESLSEPE RAWAGAFEQC ADRPGLHAVA RDLVIALNRL GLRGWEHLFA
LADGGDGLAA GCGLRWDARI PRIYLGPDDL AAGERLQRSA GGRVVRLSRA DLVRDWPALG
RSVPLPDGVR EVTAAVEVDG YAVNIHDLAT VLIDRLRAAG VEVRAGTRVE RIETDIETDI
ETDIDGNLDG NPDGNGNEAG HEIGNGAGSG VRLHLADGST LRTGWAVVTV AGRDLQRLLG
AAWPGAGAVA HLLGLSLTLP NPGLRRPVKV HAGDPLGVIN VTLSADGARI HVSGGFGYLG
TAVRAAADSG VARLRAVFEQ AVAGLFPTLR RPDGSVEMLD VRVCERPATP DGLPLVEAVA
DHGGRVIVAA GTNAGGTVQA PAVAMLVADL LAGTPRCATL AMAGDRAGLP PIRS
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