Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1268 |
Symbol | |
ID | 3906114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1514545 |
End bp | 1515150 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878602 |
Product | putative metalloprotease |
Protein accession | YP_480375 |
Protein GI | 86739975 |
COG category | [R] General function prediction only |
COG ID | [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.16283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAT TCGTTGCCAA CGAGTCGGGC GCGAGTGACG TCGACGAGGT GAGGCTGGCC GCGCTCGCCC GGTTCGTGCT CGACGCCATG AAGGTGAACC CGCTCGCCGA GCTCTCGGTG ATGCTGGTAG AGCCGAAGGC GATGACCGAT CTGCACGTCC GGTACATGGG CGAGGAGGGT CCGACCGACG TCCTGTCCTT CCCGCAGGAC GATGCCTTTG ACGCCTCGTG GTCGGAGTCG GTCGACGACG ATCCGACTAC CCTGCTCGGC GACGTCGTGC TGTGCCCGGA CGTCGCGCGG CGGCAGGCGG AGCAGGCCGG TCACTCCTTC GATCGCGAGC TGTCCCTGCT GTGCACCCAC GGCATCCTGC ACCTGCTCGG CTACGACCAC GCCGAGCCGG ACGAGGAACG CGAGATGTGG AAGGTACAGA GCCAGCTGCT CGCGTCGTGG GACGGCGCGG ACGGCGCGGA CGGCGCGGAC GGCGCCCGCG GTGCCGCGGA CGGTGCCGCG GACGGCGGCG AGGGCCGCCG TGGTGACCAG GGCCGCCGTG GTGACCAGGG CCGTGGCGGT GGCGCCGGAG AGCCCCCTGC CGCGCCCGCA CGCTGA
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Protein sequence | MAVFVANESG ASDVDEVRLA ALARFVLDAM KVNPLAELSV MLVEPKAMTD LHVRYMGEEG PTDVLSFPQD DAFDASWSES VDDDPTTLLG DVVLCPDVAR RQAEQAGHSF DRELSLLCTH GILHLLGYDH AEPDEEREMW KVQSQLLASW DGADGADGAD GARGAADGAA DGGEGRRGDQ GRRGDQGRGG GAGEPPAAPA R
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