| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1218 |
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| Symbol | |
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| ID | 3903572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1455263 |
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| End bp | 1458847 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878551 |
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| Product | ribonuclease |
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| Protein accession | YP_480325 |
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| Protein GI | 86739925 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.993223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCGG CGGATACCAC CGAAGCCGAC GCTCCCTCGA CCACCCCGGT CGGCGAACCA
GGTCCGGTCG ATAAACCCGC CACCGTCGAA TCCGTCACTG TCGTCCCGGC CCGGGACGAC
ACGGCCCGGG ACGACACGGT GGAGGCCACC GAACCGGTGC CGGCGCGGCG CACCCGGGCG
GCACGCAGCC GCCGCGCGGT GCGTGAGGTG ACCGAGGTGC CGGTTGCCCC TCCCGCCGAG
GACGCCCCTC CCGCCGAGGA CGCCCCTCCC GCCGAGGACG CCCCTCCCAC CGAGGACGCG
CCGCGGGACG TCGTATCGCC GGACGTCGCT GCGAAGCCGA AACGGACCAG GGCCCGTCGT
GCCATCTCCG GACTGATGAC GCCCGCTGCC GCGGTGCCGG ACCCGGCCGG GTCCGGCACC
GCGGCGGCCG GGCCGGTCGC CGCCGGGCCT GGCGATGCGA CCATCCTCGG TCCGGCGATG
CCGGATGTCG GTGCGACCGG GTCCGTCGGT GTACCCGCGG GTTCGACCGC CGCCGTGGCG
TCGGCTCCCG ACACGCCCGG GCCTACGGAC ACATCCGGGC CTACGGACAC GCCTGGGCCC
ACGGAACCGG AGTCCGCGCA GCCCGGGACC GACGAGCCCG GCGTCGCCGA GCCGGCGGCC
CGGGAGTCGA CCGCTGAGTC GAGATCTGCC GAGCCGAGCT CTGCCGAGCC GAGCTCTGCC
GAGCCCGAGG CCGGCAGCAC CCGGAGCGCG GCGACAAGGG CCAGGCGGGC GACCGCTCCG
ACCTGGGCCG GGATCCATAA CGAGCCGGTC GTCGAGACGA TGATCCGTCC CGTGCTCCGG
CGACCGGCCG CCATGGTGAC CTTCCAGGCT CCCGAACCGG CGGTCGTGGA GGCTCGCTGG
CGGCGTGCCG CCGAACTCGG ATCCGCCGCC ACCGCGGTGG ATGCCGTGGC GGGCACGGCG
TTCCCGTCCG CCGAGCGGCG GCATGCCGAG GCACCGGCTC ACCCCCGGGA CGAGGCGGAC
GTGGCCACCG ATCCCGACAC GACCGATCCC GACACGATGG GCGACCTCAC GGGCGGCGAG
GAGGACAGCG AATTCGACGA CGACCCGGAT GGGGGCGGCT CGGCCTCCAC CCGCCGTCGG
CGCCGTGGTC GCCGTGGTCG TGGTCGGGCC CGGGGCGACG AGGACGGCGT GGAGTCCGGC
CCGGAGGACG GCGCCGCGGC CGCGGACGAC ACGGGTCGCG AGGGTGTGGC ACAGGACACG
GACGGTGTGG ACGGCTCGTC CGTGGCCGGG CAGGGAACCG GGTCGGTGCC CGCCGTCGCG
TCGGATGAGG GCGCCGAGAC GACCCCCGGC GCGGCGGAGG AAAGTGCCGA GCGTGACGGT
GAGGACGAGG ACGACCGGCT GGGAGGGGCC CGCCGTCGGC GGCGGCGGCG CCGTCGCGCC
GGCGGCGACG AGCCGGCGCT CGCCGACGAC CCGCCGAACA CGGTCGTCCA CGTCCGGGAG
ACCCGCAAGG ACGAGGACCT GGTCCGGGGG CTGAGCGGGT CCACCCGTCT GGAGGCCAAG
CGTCAGCGGC GCCGGGAGGG CCGCGACAGT GGTCGGCGTC GGCCACCGAT CGTCACCGAG
GCGGAGTTCC TGGCCCGGCG GGAGTCGGTC GAACGCCGGA TGGTCGTCCG CCACGCGGGG
GAGCGCACCC AGATCGCCGT GCTGGAGGAC GGGGTACTCG TCGAGCACTT CGTGACCCGG
GCGAGCTCGT CGTCCTATGC GGGCAACGTC TACCTCGGCC GAGTACAGAA CGTGCTGGCC
AGCATGGAGG CGGCCTTCGT CGACATCGGT AAGGGACGCA ATGCCGTCCT CTACGCCGGC
GAGGTCAACT ACGACGCATC CGGGCTGGAC GGTCGGCCTC GCAAGATCGA GCAGGTGCTC
AAGTCCGGTC AGTCGGTCCT GGTCCAGGTG TCCAAGGATC CGATCGGGCA CAAGGGCGCG
CGGCTCACCA GCCAGATCAG TCTGCCGGGG CGGTACCTGG TGTTCGTCCC GGACGGACAG
AACGCCGGGA TCAGCCGCAA GTTGCCGGAC ACCGAACGAG CTCGGCTCAA GAGCATCCTG
AAGAAAATCA CGCCCGAGGA CGGTGGGGTC ATCGTGCGCA CCGCAGCCGA GGGTGCCAGC
GAGGCCGAGC TGGAACGCGA CATCGAGCGG CTCGCCGCCC AATGGGAGGA CATCGAGCGC
AAGGCGAAGA AGGCGTCGGC GCCCTCGCTG CTCTACGGCG AGCCGGACCT GGTCGTCCGG
GTGATCCGGG ACATCTTCAA CGAGGACTTC ACCGAGCTGG TCGTCCAGGG CTCGGGTGAG
GCCATCACGA TCGAGGAGTA CATCGACACA GTGGCTCCCG ACCTGCGGTC GCGGATCCGC
CGCTACACCG GAACCGGTGA CGTCTTCGCC GAGTACCGGG TAGACGAGCA GCTCGCCAAG
GCCCTCGACC GCAAGGTCTG GCTGCCCTCG GGTGGATCGC TCGTCATCGA CCGGACCGAG
GCGATGACGG TCATCGACGT CAACACGGGC AAGTTCACCG GCAAGGGCGG CAACCTCGAG
GAGACGGTCA CCAAGAACAA CCTGGAAGCC GCCGAGGAGA TCGTCCGTCA GCTGCGGCTG
CGGGATATCG GTGGCATCAT TGTCATCGAC TTCATCGACA TGGTTCTGGA GAGCAACCGA
GAACTGGTCC TGCGCCGGCT CACCGAGTGC CTTGGCCGGG ACCGTACCCG GCACCAGGTC
GCCGAGGTGA CCAGCCTCGG GCTGGTCCAG ATGACCCGCA AGCGGGTGGG GCAGGGCCTG
CTGGAGGCGT ACAGCGAGCC GTGCGTGCAC TGCAACGGCC GCGGGGTGGT CATCCACCTC
GACGGCGGCA GCGGTGCACA CGCCGCAGCC GGCGTGCCGA GCGGGACCAT TGTGTCCGGT
GCCGGTCAGC CGACTCCGGT GGCGGTGCCC GCGCCGGCGG AGGGGTCCGG GTCCGGTCGT
CGGGTCCGCT CCTCGTCCGC GAGTGCCGTG TCCGCGAGTG CCGTGTCCAC GAGTGCCGTC
GACGGCCCCG CGATCATCGC CGCCGCGTCG GCCGAGCCTA CGTCCGCATC CGAATCCGAG
GCGTCCGGCG GACCTGGCGA ACCCATCGGA TCCGCCGCAT CATCGACGCC CGACGCCGCG
GAGAACGTCG CCGTGACGGC CGGCGAGGGT GCGATAGCCA CCGCGGGCGT CACCGCCGCG
GATACGGTGC CCGCGCCCGA GCCCGCGCAT GCGGCCGACA GTGCGGCGGG GCCGGCGGGC
GGGGCCGCAG CTGCCGCCGC CCCGGGACTC GGGGCAGCCG GTTCCCCAGC CGGGTCGAAC
GGGCATGTGC CCGCTGGCGG TGGCTCCGGC GCGGGCGGCC TCGAGGAGGC CCTGCCGCCG
GTGTACGCCA ACTCCGATGA TCCCGACAGC CTCGCGACCG CGGACAACGC CTTGTCCACT
GTGGGCAAAC CGGCCCGGGG CCGACGACGG CGGGCCTCCC GGCCGGTGTC CAAGCCGGCC
GAGTCGCTGG AGTCCGTGCC CTCGGCGGAA CCCCCGAGCG CCTGA
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| Protein sequence | MEPADTTEAD APSTTPVGEP GPVDKPATVE SVTVVPARDD TARDDTVEAT EPVPARRTRA
ARSRRAVREV TEVPVAPPAE DAPPAEDAPP AEDAPPTEDA PRDVVSPDVA AKPKRTRARR
AISGLMTPAA AVPDPAGSGT AAAGPVAAGP GDATILGPAM PDVGATGSVG VPAGSTAAVA
SAPDTPGPTD TSGPTDTPGP TEPESAQPGT DEPGVAEPAA RESTAESRSA EPSSAEPSSA
EPEAGSTRSA ATRARRATAP TWAGIHNEPV VETMIRPVLR RPAAMVTFQA PEPAVVEARW
RRAAELGSAA TAVDAVAGTA FPSAERRHAE APAHPRDEAD VATDPDTTDP DTMGDLTGGE
EDSEFDDDPD GGGSASTRRR RRGRRGRGRA RGDEDGVESG PEDGAAAADD TGREGVAQDT
DGVDGSSVAG QGTGSVPAVA SDEGAETTPG AAEESAERDG EDEDDRLGGA RRRRRRRRRA
GGDEPALADD PPNTVVHVRE TRKDEDLVRG LSGSTRLEAK RQRRREGRDS GRRRPPIVTE
AEFLARRESV ERRMVVRHAG ERTQIAVLED GVLVEHFVTR ASSSSYAGNV YLGRVQNVLA
SMEAAFVDIG KGRNAVLYAG EVNYDASGLD GRPRKIEQVL KSGQSVLVQV SKDPIGHKGA
RLTSQISLPG RYLVFVPDGQ NAGISRKLPD TERARLKSIL KKITPEDGGV IVRTAAEGAS
EAELERDIER LAAQWEDIER KAKKASAPSL LYGEPDLVVR VIRDIFNEDF TELVVQGSGE
AITIEEYIDT VAPDLRSRIR RYTGTGDVFA EYRVDEQLAK ALDRKVWLPS GGSLVIDRTE
AMTVIDVNTG KFTGKGGNLE ETVTKNNLEA AEEIVRQLRL RDIGGIIVID FIDMVLESNR
ELVLRRLTEC LGRDRTRHQV AEVTSLGLVQ MTRKRVGQGL LEAYSEPCVH CNGRGVVIHL
DGGSGAHAAA GVPSGTIVSG AGQPTPVAVP APAEGSGSGR RVRSSSASAV SASAVSTSAV
DGPAIIAAAS AEPTSASESE ASGGPGEPIG SAASSTPDAA ENVAVTAGEG AIATAGVTAA
DTVPAPEPAH AADSAAGPAG GAAAAAAPGL GAAGSPAGSN GHVPAGGGSG AGGLEEALPP
VYANSDDPDS LATADNALST VGKPARGRRR RASRPVSKPA ESLESVPSAE PPSA
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