Gene Francci3_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1211 
Symbol 
ID3903565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1445701 
End bp1446732 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID637878544 
Productrod shape-determining protein MreB 
Protein accessionYP_480318 
Protein GI86739918 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.984944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT CGCTGTCGTT CCTCGGTCGT GACATGGCCG TCGACCTCGG TACCGCCAAC 
ACGCTGGTGT ACGTGCGTGG CCGCGGGATC GTCCTCAACG AACCGAGCGT GGTCGCGATC
AATACCACCA CCTCGGGCAT CCTCGCCGTC GGAACCGACG CCAAGCGGAT GATCGGCCGG
ACGCCCGGCA ACGTGGTGGC CGTGCGGCCG CTGAAGGACG GCGTCATCGC CGACTTCGAG
ACGACCGAGC GGATGCTGCG CTACTTCATC CAGAAGGTGC ACCGGCGGCG CCATTTCGCC
AAGCCCAGGC TGGTCGTATG CGTGCCCTCC GGCATCACGG GCGTGGAACA GCGGGCCGTG
AAGGACGCCG GCTATCAGGC CGGCGCCCGC AAGGTCTACA TCATTGAGGA GCCGATGGCC
GCGGCGATCG GCGCTGGTCT GCCGGTGCAC GAGCCGACCG GCAACATGGT CGTGGACATC
GGCGGGGGTA CCACCGAGGT CGCCGTGATC TCACTGGGCG GCATCGTCAC CAGCCAGTCG
ATCCGTACCG CCGGGGACGA ACTCGACGTC GCGATCATCT CCTACGTCAA GAAGGAGTAC
TCGCTGATGC TCGGCGAACG CACCGCCGAG GAGATCAAGA TGGCGATCGG GTCGGCGCAC
AAGGTTCCCG ACGAGCCCAG CGCCGAGATC CGTGGGCGTG ACCTGATCAC CGGACTGCCG
AAGACGATCG TGGTGACCGC GGAGGAGATC CGCAAGGCGA TCGAGGATCC GGTCAACGCG
GTCATCGACG CGGTGAAGGT GACCCTCGAC CGCTGCCCGC CGGAGCTCTC CGGCGACATC
ATGGACCGCG GCATCGTCCT CACCGGCGGC GGGGCGCTGC TGCGCGGTCT CGACGAGCGG
CTGCGGCAGG AGACCGGCAT GCCGATCCAC ATCGCGGAGA ATCCACTGCA TTCGGTTGCA
ATGGGGTCGG GCAAGTGTGT GGAGGAGTTC GAGGCCCTAC AGCAGGTACT GATCTCCGAG
CCGCGGCGCT AG
 
Protein sequence
MSSSLSFLGR DMAVDLGTAN TLVYVRGRGI VLNEPSVVAI NTTTSGILAV GTDAKRMIGR 
TPGNVVAVRP LKDGVIADFE TTERMLRYFI QKVHRRRHFA KPRLVVCVPS GITGVEQRAV
KDAGYQAGAR KVYIIEEPMA AAIGAGLPVH EPTGNMVVDI GGGTTEVAVI SLGGIVTSQS
IRTAGDELDV AIISYVKKEY SLMLGERTAE EIKMAIGSAH KVPDEPSAEI RGRDLITGLP
KTIVVTAEEI RKAIEDPVNA VIDAVKVTLD RCPPELSGDI MDRGIVLTGG GALLRGLDER
LRQETGMPIH IAENPLHSVA MGSGKCVEEF EALQQVLISE PRR