Gene Francci3_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1202 
Symbol 
ID3903476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1435019 
End bp1435345 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content69% 
IMG OID637878533 
Productexcisionase/Xis, DNA-binding 
Protein accessionYP_480309 
Protein GI86739909 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00214116 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.689393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCAAT CCCTTACCAG CCCACAGGCG GGCGGTGTGG TCCTCGCGAT ACCCGCCCGC 
CACCGAGCGT CGACGCGACC GGCCGCCGGT ACGACCTCCC CACCGGCGCC GTTGGGCGAC
ATCCTGACCG TCGAGCAGGC CGCTGCCCGG ATGAACATGA GTGTCCGGTA CGTGCGCCGC
CTGGTTGCGG AACGGCGTAT CGCGTTCCAC CGCATCGGCC GGTCGATCCG GCTGACCTCC
GCCGACGTTG ACGCCCATAT CGCGGCCGGT CGTGTCGAGT CGCTCACGGT CTCCAAGGTT
TGGCGCGACG TACGGAGCGT GATCTGA
 
Protein sequence
MAQSLTSPQA GGVVLAIPAR HRASTRPAAG TTSPPAPLGD ILTVEQAAAR MNMSVRYVRR 
LVAERRIAFH RIGRSIRLTS ADVDAHIAAG RVESLTVSKV WRDVRSVI