Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1202 |
Symbol | |
ID | 3903476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1435019 |
End bp | 1435345 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637878533 |
Product | excisionase/Xis, DNA-binding |
Protein accession | YP_480309 |
Protein GI | 86739909 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00214116 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.689393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCAAT CCCTTACCAG CCCACAGGCG GGCGGTGTGG TCCTCGCGAT ACCCGCCCGC CACCGAGCGT CGACGCGACC GGCCGCCGGT ACGACCTCCC CACCGGCGCC GTTGGGCGAC ATCCTGACCG TCGAGCAGGC CGCTGCCCGG ATGAACATGA GTGTCCGGTA CGTGCGCCGC CTGGTTGCGG AACGGCGTAT CGCGTTCCAC CGCATCGGCC GGTCGATCCG GCTGACCTCC GCCGACGTTG ACGCCCATAT CGCGGCCGGT CGTGTCGAGT CGCTCACGGT CTCCAAGGTT TGGCGCGACG TACGGAGCGT GATCTGA
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Protein sequence | MAQSLTSPQA GGVVLAIPAR HRASTRPAAG TTSPPAPLGD ILTVEQAAAR MNMSVRYVRR LVAERRIAFH RIGRSIRLTS ADVDAHIAAG RVESLTVSKV WRDVRSVI
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