Gene Francci3_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1159 
Symbol 
ID3903587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1380438 
End bp1380875 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content74% 
IMG OID637878491 
Producthypothetical protein 
Protein accessionYP_480267 
Protein GI86739867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.417033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACTG GTGAGCCGTT CACCCACGAG CAGCTCGACC GGCTGAACCG GGCCCGGGAG 
CTTGCCGAGA CGCGTACCGG CATCCACGTC AGCATCCGGA TCGGCGCGGT GCGCGGCGAC
GTCCGGCTCG CCGCCGAGCG GATCCTCGCG AACCTCGTCA ACGACGCGGG GCGGGATGCC
GCCGTGCTGA TCCTCGTCTC GCCCGGGCAG CGGTTCGTAC GGATCGCCAC GACCCCGGCC
GCCAGGAAGC GGATCAGCGA CTCGGCCACC GGGCTCGCCG CGTTGACGAT GGCCTCCAGC
TTCGCGCTGG GCGATCTGGT CGGCGGCCTG ATCACCGGCA TCCGCCAGCT CGCGGACGCG
GCAGGTGGCG CGGGCGGCGC AGCCGCCGGG ACCCTCCCCC CGACGCAGCC TTCGTTGGCG
GTCAGCCCGA CGCCCTGA
 
Protein sequence
MATGEPFTHE QLDRLNRARE LAETRTGIHV SIRIGAVRGD VRLAAERILA NLVNDAGRDA 
AVLILVSPGQ RFVRIATTPA ARKRISDSAT GLAALTMASS FALGDLVGGL ITGIRQLADA
AGGAGGAAAG TLPPTQPSLA VSPTP