Gene Francci3_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1140 
Symbol 
ID3906619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1355120 
End bp1355524 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content73% 
IMG OID637878471 
Producthypothetical protein 
Protein accessionYP_480248 
Protein GI86739848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.180925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAC CGCGACGCAT TCCGGTGCGT TTCGAGGACG TGTTCCCGGC GGGGGCGTTC 
GTCCTCGGCG TGGAGGCGGC GAACGACTAC GACAAGGTAA AGGCGAACGC TCCCGATCCA
CAGGAGCGCG ACCCGAACAC CGGCGAGCGG GTCTGGGCGG TCCGCGTGCT GGACCCCGAC
CCGGCGGCCC GGCAGGCGGA GCTGAAGGTG AAGGTCGCCG CCGCGGTGCA GCCGGTCCTG
CCGGAGGCGA TGCCGGGCAC GCCGTTCCGG CCGGTGCAGT TCGAGGGGCT GACGATCACA
CCGTGGGTGG ACATCAACGG GAAGTTCCCC AAGCAGGGGT ACGCCCTGCG CGCGGTGGGC
CTGCGGCAGG TCGGCCCGCT GCGGCGGACG GGGGCGGCGG CGTGA
 
Protein sequence
MAIPRRIPVR FEDVFPAGAF VLGVEAANDY DKVKANAPDP QERDPNTGER VWAVRVLDPD 
PAARQAELKV KVAAAVQPVL PEAMPGTPFR PVQFEGLTIT PWVDINGKFP KQGYALRAVG
LRQVGPLRRT GAAA