Gene Francci3_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1135 
Symbol 
ID3906614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1352080 
End bp1352550 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID637878466 
ProductNUDIX hydrolase 
Protein accessionYP_480243 
Protein GI86739843 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0641209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACGGA TCGACTACTT CAACGACCCG AACGCCCCCA AGGCGAACAG CGTCGTCCCG 
TCCGTCACCG CCGTGGTCAC CGACGAGGCC GGGCGGATCC TCATGGTCCA CAAGACCGAC
AACAACCTGT GGGCCCTGCC CGGCGGCGGC ATGGACCTCG GCGAGTCCAT CACCGACGCC
GCCGTCCGCG AGACCAAGGA AGAGACCGGC ATCGACATCG AGGTGACCGG ACTCATCGGG
GTCTACACCA ACCCCCGGCA TGTCCTGGCC TACGACGACG GCGAGGTCCG CCAGCAGTTC
TCGCTCTGCT TCACCACCCG CAATCTTGGC GGAGAGCTAC GCACCTCGAG CGAGACGAAG
GAGGTCAAGT TCGTCGCGCC CGAGGACCTG GACGGGCTGA ACATCCACCC ATCGATGCGC
CTCCGCATCG ATCACTACCT GGAGAACCGG GCCACGCCCT ACCTCGGCTG A
 
Protein sequence
MARIDYFNDP NAPKANSVVP SVTAVVTDEA GRILMVHKTD NNLWALPGGG MDLGESITDA 
AVRETKEETG IDIEVTGLIG VYTNPRHVLA YDDGEVRQQF SLCFTTRNLG GELRTSSETK
EVKFVAPEDL DGLNIHPSMR LRIDHYLENR ATPYLG