| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1030 |
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| Symbol | |
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| ID | 3906272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1221773 |
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| End bp | 1223491 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878363 |
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| Product | hypothetical protein |
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| Protein accession | YP_480142 |
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| Protein GI | 86739742 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.16283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTCC CTCCCCCTCC CGGCCCTGAC CCGGCCGGCC CCCACGACCC CACCAACCGT
GACGATCGGC CCGGCTCTCG GGCGGCGCGG ATGCGGATGC CGCTCGCCCG TGCGGTCGTC
GAAGCGGTCG CCGTCGAGAA CGGCGTGTGC GTCCGGCCGA TGGCGATGCG GCGCACGAAC
CTCGACACCG GCGAAACCGA GATCATCCCC GTACCCTGCG GCGCCACCCT GGCCAGCAAG
TGCCCGACCT GCGCGGAGAA GGCCCGGCGG CTGCGGATGG CGCAGTGCAG GGCAGGGTGG
CACCTCGACG ACGAACCGCT TCCCGACCCG GACCCGCCGT CCGATGACGC GAAGGTCCTT
GCCGGCTTCC GCGCGGATCT CGAAGTCGCC CGGCAGGACG CGGAACGGGA CAGTGACCCG
GCCGGCGTCG CCGAGATCGA CGCGCTGATC GGCCAGGTGG ACGAGGAACT CAACGCCCTG
GGCGTGCGCG GCAAGACTGC CCCGGACAAC CGGGACCGGC CCCGCCGTGC CCGCTCGACC
CGCCGGCGGC AGGACGCTGC CGACCTGCCG CGGTTGCCCG TGGAGAAGCG CACGATCGGC
CGGACGTATG AGGCGGCGGA CGGCACGACC TGGCGGCCGT CGATGTTCCT CACGCTGACC
TGCGACACCT ACGGGCGGGT GAACTCCGAC GGAGCTCCGG TGGACCCAGC GTCGTATGAC
TACCGGCGGG CGGCCCGCGA CGCGATCCAC TTCCCGAAGC TGATCGACCG CTTCTGGCAG
AACCTCCGCC GTGCGGTCGG CTGGGACGTG CAGTACTTCG CCGCGCTCGA ACCGCAACGG
CGGCTCGCCC CGCACCTGCA CGCGGCCCTC CGCGGAACCG TGCCACGGGC CCTGCTGCGG
CAGGTGGCGG CGGCCACGTA TCACCAGGTC TGGTGGCCAC CGTCTGGCCA GCCCGTCTAC
CTGGACACGG CACTCCCGAC CTGGGCAAGC GAAACGGGCG GATACGTCGA TCCGGCTTCC
GGCCGGCCGC TGCCCACCTG GGATGAGGCG CTCGACGCCA TCGGAGACGA GGACGAACCG
TCCCATGTGG TGCGCTTCGG CCCGCAACTG CAAGCGGACG GCTTCACCTC GAACTCGGCG
CACACCGGCC GGATGATCGG CTACCTCTGC AAGTACCTGA CCAAAAGCCT CGACGCCTGC
CACACGGCCA CCACCGACCG GCAACGGCGC CACGTCGACC GGCTCGCCGA AGCCCTGCGC
TACGAACCCT GCTCACCCAC CTGCGCGAAC TGGCTCCGCT ACGGCGTCCA GCCGAAGAAC
GCGAAACCGG GCCTCGTCCC GGGACGCTGC CGCGGCAAGG CACACCGACG GGAGACCCTC
GGCTTCGGCG GCCGGCGGGT CCTGGTGAGC CGCAAGTGGT CCGGCAAGTC GCTGACCGAC
CACAAGCATG ATCGCGTCGC GTTCATCCGG GAGCAGCTCG AAGCGCTCGG CCACACCGCC
ACCGGCCCGG CCGCGGCAAC CGACACCGAC CCGGCTCGCA CCGCCTGGAC GATGCTCCGG
CCCGGCGACC CGGCCGCACC TCGCCGCGAA CACCTGCTGT TGCAGGCCGT CGCGCAACGC
CACGCCTGGC GCGCACAGCT CGACGCGGCC CGACGCGCCG CACCCGACGA ACTTCCGGCA
ATCGGCCTCG GCCCACCGGG CAGGGCACAA GCCGCCTGA
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| Protein sequence | MTLPPPPGPD PAGPHDPTNR DDRPGSRAAR MRMPLARAVV EAVAVENGVC VRPMAMRRTN
LDTGETEIIP VPCGATLASK CPTCAEKARR LRMAQCRAGW HLDDEPLPDP DPPSDDAKVL
AGFRADLEVA RQDAERDSDP AGVAEIDALI GQVDEELNAL GVRGKTAPDN RDRPRRARST
RRRQDAADLP RLPVEKRTIG RTYEAADGTT WRPSMFLTLT CDTYGRVNSD GAPVDPASYD
YRRAARDAIH FPKLIDRFWQ NLRRAVGWDV QYFAALEPQR RLAPHLHAAL RGTVPRALLR
QVAAATYHQV WWPPSGQPVY LDTALPTWAS ETGGYVDPAS GRPLPTWDEA LDAIGDEDEP
SHVVRFGPQL QADGFTSNSA HTGRMIGYLC KYLTKSLDAC HTATTDRQRR HVDRLAEALR
YEPCSPTCAN WLRYGVQPKN AKPGLVPGRC RGKAHRRETL GFGGRRVLVS RKWSGKSLTD
HKHDRVAFIR EQLEALGHTA TGPAAATDTD PARTAWTMLR PGDPAAPRRE HLLLQAVAQR
HAWRAQLDAA RRAAPDELPA IGLGPPGRAQ AA
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