Gene Francci3_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1008 
Symbol 
ID3906695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1201116 
End bp1201661 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content72% 
IMG OID637878341 
ProductMOSC 
Protein accessionYP_480120 
Protein GI86739720 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGG GACGCCTGGT CGGGATCTAT ACCACGCCGA TCCGGGGTAC CCGGATGCGG 
GCCCGTGAGG CCGTTCGAAT GATCGAGGGT CACGGTCTCG AAGGCGACCG CTACGCCACC
GGCACCGGGA CCTACTCCGC GCGCGGTGGC GCCGGTCGCG CCGTCACGCT GATCGAGCGT
GAGGTCATCG CCGCCGTGGC CGCGGATGCC GGGGTGGCTC TGGCCGAGTG GGAGACCAGG
CGAAACCTGG TGACGGAGGG CGTCGCGCTG CTCGACCTCG TCGGGCGGAC CTTCCGCATC
GACGACGTTG TCCTGCTCGG TGTCCGGCCC TGCCCACCGT GCTCCTACCT CGAACAGCTC
ACCCGCCCCG GGGTCTGGAG CGCGCTACGC GACCGAGGTG GCCTGCGCGC AGACGTCGTG
CGTGGCGGCA CCGTCCCGAT CGGCGCGACG ATCATCATCC CGCACCGGGA GGCCGAGCCC
GTCGACGCGG TCGTGCCGGA TCACGCGGTC GCGTCGGGTG CGCCCGCCCC GACCGGTGGA
GGATAG
 
Protein sequence
MVAGRLVGIY TTPIRGTRMR AREAVRMIEG HGLEGDRYAT GTGTYSARGG AGRAVTLIER 
EVIAAVAADA GVALAEWETR RNLVTEGVAL LDLVGRTFRI DDVVLLGVRP CPPCSYLEQL
TRPGVWSALR DRGGLRADVV RGGTVPIGAT IIIPHREAEP VDAVVPDHAV ASGAPAPTGG
G