Gene Francci3_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1003 
Symbol 
ID3906690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1194959 
End bp1195783 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID637878336 
Producthypothetical protein 
Protein accessionYP_480115 
Protein GI86739715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATGG AGGAGTTGCC CGAGTGGGCC GCGGGGATCG ATGTCAATCG CCCGAGCGCC 
GCACGGATGT ACGACTACGC GCTCGGCGGA TCGCACAATT TCGCGGTGGA CCGGGAGGCG
ACGCGCGCCG CCATCGAGAT CCTCCCGGAC GCCCTGCTGA TCGCCAGATC GAACCGGTTG
TTCCTGCACC GGGCGGTGCG CTTCCTCGCT GCCGAGGCCG GGATCACACA GTTTCTGGAT
CTCGGCTCCG GGGTGCCGAC GGTCGGTAAC GTCCATGAGA TCGCCGAAGG GGTGAATCCG
GAGGCCCGGG TCGTCTATGT CGACATCGAC CCGGTCGCCG TCATCCACTC CCGGATGCTG
CTGGCCGACA ATCCGCGGGC CACGGTGCTC CAGGCGGATG TTCGGCAGCC CGCGTCGATC
CTCGGCTCCA GCGCGGTGGC CGAGCTGCTC GATCTTTCTC AACCGATCGC CGTGCTCATG
GTGACGGTTC TGCATTTCGT CCCCGACAGC GATGACCCGG CTGGCGTCAT CGATTCCTTC
CGGGAGGCGA CGGCGCCGGG CAGCTACCTG GCCATCTCGC ATGTGATCGC GGACGAGCGG
GCCGTAGGGA TCAACCAGGC CGGCAAGGTC TACGACGAGA CCCCTACCGG GGTGACCCCG
CGTTCCCGTG CGGAGATCGC CGGTCTGCTC CGCGGATACG AGCTCGTTGA CCCGGGCCTG
GTCTACCTGC CGGCCTGGCG CCCGGACGCG GCGAGCATGG GCGCCGATCC CCTCGCGGAC
AACCCGGTGC GTTCCACGAT ACTTGCCGCG GTCGGGCGCC GGTAG
 
Protein sequence
MIMEELPEWA AGIDVNRPSA ARMYDYALGG SHNFAVDREA TRAAIEILPD ALLIARSNRL 
FLHRAVRFLA AEAGITQFLD LGSGVPTVGN VHEIAEGVNP EARVVYVDID PVAVIHSRML
LADNPRATVL QADVRQPASI LGSSAVAELL DLSQPIAVLM VTVLHFVPDS DDPAGVIDSF
REATAPGSYL AISHVIADER AVGINQAGKV YDETPTGVTP RSRAEIAGLL RGYELVDPGL
VYLPAWRPDA ASMGADPLAD NPVRSTILAA VGRR