Gene Francci3_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0968 
Symbol 
ID3903875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1145167 
End bp1147803 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content73% 
IMG OID637878302 
Productaminopeptidase N 
Protein accessionYP_480081 
Protein GI86739681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID[TIGR02412] aminopeptidase N, Streptomyces lividans type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCC TCACCCGGGA CGAAGCCCTC GCCCGCGCCG GCCTGGTCCG CGTCGATGGC 
TACGAGATCG AGCTCGACCT GACCGCGGCT CGCACGTCGA CGGAGTTCGG CTCGACGACC
AGGGTGCGCT TCAGCCTCCG TCCCCCCACG GACGGCTCCC TCGCCACGGA CGGCTCGTCG
GCGGACGGCG AACCGGCACC GGCGACGTTC GTCGAGCTCA AACCGGTATC CATCCAGCAA
CTGTGGCTCA ACGGCCAGCC GCTGGACCCC TCCGCCGTCG ACGGCAACCG GCTCCCCCTC
GCGACGCTGC ACGCGACGAA CGAGCTCGTG GTGACGGCCA CGATGAGGTA CTCGAACACC
GGCGAGGGGC TGCACCGGTT CACCGACCCG GAGGACGGCG AGGTCTACCT GTATGCGCAG
ACCTTCCTCG ACGACGCCCA GCGGATGTTC GCCTGCTTCG ACCAGCCCGA TCTCAAGGCG
CCGGTGCGCC TGAGCGTGGC CGCACCCCCC GACTGGACGG TGCGGGCGAA CGGTGCCGGG
AAGCAGGCCT CGCCGGGGCG GTGGGAGTTC ACCGAGACGG CACCCCTGGC GACCTACTTC
GTGACGGTGG TCGCGGGGCC GTACCACCTC GTCGAGGACT TCCACGACGG CATCCCGCTC
GGGCTGCTCT GCCGCCGCTC ACTCGCGCCG TACCTCGACG CCGACGCGGC GGAGATCTTC
GGCGTCACCC GGGCCTGCCT GGACCGCTAC CACGAGCTGT TCGCGAGCCG GTACCCGTTC
GGGACCTACG ATCAGGCGTT CGTGCCCGAG TTCAATGCCG GCGCGATGGA AAACCCGGGG
TGCGTGACCT TCCGGGACGA GTTCGTGTTC CGCTCGGCGG TGACCGAGGC CGAACGGGAG
CTGCGTGCCG TCGTCATCGC CCACGAGATG GCCCACATGT GGTTCGGTGA TCTGGTCACC
ATGCGCTGGT GGGACGACCT GTGGCTGAAC GAGTCGTTCG CCGAGTACAT GGGCTATCGG
GTGACCGCCG AGGCGACGCG GTTCACCGGG GCGTGGACCA GCTTCGCCGT CGGTCGCAAG
AGCTGGGGCT ACGCCGCCGA CCAGCGGCCG TCGACGCACC CGGTGGCCCC GGCCGACGTC
CCCGACACCG CACTCGCCCT GCTGAACTTT GACGGCATCT CCTACGCCAA GGGAGCGTCG
GCCCTGCGGC AGCTGGTCGC CTGGGTGGGC GACGGCGCCT TCCTGACCGG GCTGCGGACG
TACTTCGCCC AGCACGCCTT CGCCAACGCG TCCCTGGCCG ACCTGCTCGC CGCGCTGACC
ACGGCGAGCG GCCGGGACCT CGCCGGCTGG GCCGAGGTGT GGCTGCGCCA CGCACAGGTC
AACACGCTGC GCCCCGAGAT CACGATCGGC TCCGACGGCC GCCTCGCCCA GGTCGCAGTG
GTCCAGACGG CACCGCCGAC GCACCCGACG CTGCGTCCGC ACCGCATCGG CATCGGCGTC
TACGGCCCGG CGGAGCAGAC CGAGCCGATG GAGCCGACCA ATCCGACGGA GCCGACCAAT
CCGACGGAGC CGACCGGGCC GATCGTGCTG CTCCGCCGGG TGGAGGTGGA CATCGATCCG
GCGGCGCCGG GCGGGCGCAC CGGGATCGCG TCACTGGTCG GGAGCGAGGC GGGACGCCTG
CTGCTGGTCA ACGACGGCGA CCTGACCTAC GCCAAGATCC GTTTCGTCCC GGCCGATCTC
GCCGCTTTGC CCACTGTCCT GCCGCGGACG GCCGATCCGC TTGCCAGGGC GATCATCTGG
GCGGCCGCGG CCGACGCGAC CCGGGACGCC GAATGGCCCG CCGCCGACTA TCTGACGCTC
GCCGCGGGTG CGCTGCCCCG GGAGACCGAG ATCGCCGTCT TCGAGGACGC CCTGCGTTTC
GCCCGGGCCA CCGTGCTGAA CCGCTATCTC GCGCCGTCGG CGCGACCGGC GGCGGCGCAG
GCGCTCCACG CCGCCTGCGC GCGGGCCTTC GCGGCCGCAG CACCGGGAGG CGGTCATCAG
CTCTCCGCCG CCCGCGGGGT CATCGGGTGT AGCGGACCGG CGCAGGCGGG AACGCTGGCG
GCGTGGCTCG CCGGGACGGA CGTGCCGGCC GGACTGGTCA TCGACCCGGA ACTACGCTGG
ACTCTGCTGC ACCGGCTGGT CGTACTCGGG CGGGCCGGGG AGGGGGAGAT CGCGGCCGAG
AGCCGGCGTG ATCGCAGCGC CCGGGCCGCC GAGCATGCGG CGCGGGCCCG CGCCGCCGTT
GCCGATCCCG AGGCGAAAGC CCGGGCCTGG CGGATGATCG TGGACGACGA CACGATGTCC
GCCCGGCTGG TCGCCGCGAC GGCCGAGGGT TTCTGGCAGC CCGAGCAGGC GGATCTCACC
GACGGGTACG TCTCCCGCTA CTTCGAGCAG ATGCCGGCGA TGGCGGCCCG GCGATCCCCG
CACGCCGCCC GGCAGATCGC CACCCACGCC TATCCGCAGT TCGCCGTGTC CGTGGGGACG
GTGCGGGAGG CGGACGCCCT GCTGGCCCGC GACCGTCTCG ACCCGCTCCT GCGCCGCGTC
GTCGTCGACG CGACCGACGA ACTCCGCCGA GCGGTGCGGG CCCGTCTCCG CCCCTGA
 
Protein sequence
MHSLTRDEAL ARAGLVRVDG YEIELDLTAA RTSTEFGSTT RVRFSLRPPT DGSLATDGSS 
ADGEPAPATF VELKPVSIQQ LWLNGQPLDP SAVDGNRLPL ATLHATNELV VTATMRYSNT
GEGLHRFTDP EDGEVYLYAQ TFLDDAQRMF ACFDQPDLKA PVRLSVAAPP DWTVRANGAG
KQASPGRWEF TETAPLATYF VTVVAGPYHL VEDFHDGIPL GLLCRRSLAP YLDADAAEIF
GVTRACLDRY HELFASRYPF GTYDQAFVPE FNAGAMENPG CVTFRDEFVF RSAVTEAERE
LRAVVIAHEM AHMWFGDLVT MRWWDDLWLN ESFAEYMGYR VTAEATRFTG AWTSFAVGRK
SWGYAADQRP STHPVAPADV PDTALALLNF DGISYAKGAS ALRQLVAWVG DGAFLTGLRT
YFAQHAFANA SLADLLAALT TASGRDLAGW AEVWLRHAQV NTLRPEITIG SDGRLAQVAV
VQTAPPTHPT LRPHRIGIGV YGPAEQTEPM EPTNPTEPTN PTEPTGPIVL LRRVEVDIDP
AAPGGRTGIA SLVGSEAGRL LLVNDGDLTY AKIRFVPADL AALPTVLPRT ADPLARAIIW
AAAADATRDA EWPAADYLTL AAGALPRETE IAVFEDALRF ARATVLNRYL APSARPAAAQ
ALHAACARAF AAAAPGGGHQ LSAARGVIGC SGPAQAGTLA AWLAGTDVPA GLVIDPELRW
TLLHRLVVLG RAGEGEIAAE SRRDRSARAA EHAARARAAV ADPEAKARAW RMIVDDDTMS
ARLVAATAEG FWQPEQADLT DGYVSRYFEQ MPAMAARRSP HAARQIATHA YPQFAVSVGT
VREADALLAR DRLDPLLRRV VVDATDELRR AVRARLRP