| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0952 |
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| Symbol | |
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| ID | 3902922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1123647 |
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| End bp | 1126136 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878286 |
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| Product | putative helicase |
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| Protein accession | YP_480065 |
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| Protein GI | 86739665 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.249866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACCA CGCAGGACGT CGAGCGCGCC CGTGAACAGG CGTACCTGGA CACGCTGTAC
ATCCGGTTGG ACGAGGTCCG CGAGATCACC CGTGGGCAGC TGCGCCGGGT CCTGCTGGAA
AGTGGCACGG GCACCCCCCA ATCACTCGTG GAACGGGACG TGTTCGCGGC GACCCACGCC
GACCGGCTCG CCCGCCTCGA CGCCGCCGAA GGGCGGCTGT GTTTCGGCGC GATGGACTAC
GCCGACGGGC GCCGGACGTA CATCGGCCGG ATCGGCCTGT CCGACAGCGG GCAGGAACCG
ATCCTGGTGG ACTGGCGGGC CCCGGTGGCC ACCGCCTTCT ACCGGGCGAC GCTGGCCGAT
CCGCATGGTC TGGTGCGCCG GCGTCATCTG CGGACCAAGG GCCGGGAGGT CACCGGCATC
GCCGACGACC CGTTGAGCCT GCCGGTCGAC ATGGCCACCG GCACCGGTAG CGGCACGGCC
ACGGGCAAGT CCGGCGGGGT GACGGCGTCC GGCGACACGA TGCTGCTCGA GGCGCTGGCA
GCGCCCAGGA CCGGGCGCAT GCACGACATC ATCGCCACGC TGCAGGCCGA GCAGGACCGT
ATCATCCGGG CGCGGGCGAA CGGCGTGCTC GTTGTCGACG GCGGACCGGG GACCGGTAAG
ACCGCGGTGG CGCTGCACCG TGCCGCCTAT CTGCTCTACA ACGACCGGGC TCGGCTCGAC
CAGTCCGGCG TGCTGGTCGT GGGGCCGAGT CCGGTGTTCC TGCGCTACAT CGACCAGGTG
CTGCCCTCCC TCGGGGAGAC CGGGGTGATC TTCGCCACGC CGGGACGGCT CTTTCCCGGG
GTCGACGCGC ACGGCGTCGA GGACGTCGCG ACCGCGGCGC TCAAGGGTGA TCCGAGGATG
GTCGAGGTCA TCGCCGCCGC CGTCAGGGAC CGGCAGCGGC TGCCGCGGCG AGAGGTGCTC
ATCCCCTACG ACGATCGCAT GCTGCGCCTC GGTCGCGACA CGGTCGCGCG GGCCCGCACC
CGGGCGCGGC GCAGCCGCCG CCCGCACAAC TCGGCCCGTC GGATCTTCCT GCGCGAGCTG
TTGGCTGAGC TGACCACCCA GGTGGTGAAC CAGATCCCGG GCGGGCTGCT CGACGCCGAC
GAACGTGGCC AGATCACCCG GGACCTGTGG TCGGAGGAGG GGGTCCGTAC GGCGCTCGAC
GGCCTCTGGC CGCTGCTGAC CCCCCAGCGG CTCCTCGGGG AGCTCTTCGC CGATCCGGCG
GCCCTGGCGC GCGCGGCGGG TAGCCGGCTC ACCCCGGCGG AACGATCCCT GCTCGAGGAC
CGGCGGACGG CCGCGGCGTC CGCCCGGATC CCGGTGCAGC GCGACGGCGC GGGTACGGCG
GGTACAGCGG CCGTCGATCG GGCCGATCGG GCGTGGACTC CGGCCGATGT GCCGCTGCTC
GACGAGGCCG CCGAGCTGCT CGGCGACCCG GACGAGGAGA CCGGCCGCGA GACCGCCCGC
CGTGCCGAGC GGGAACGCGA GGAGGAGCGC GAGTACGCCC GGGGCGTGGT GGACATGCTC
GGACTCGAGG GGCAGGTCGA CGCCGAGGCG CTCGCCGAGC GGTGGAGCGG GCCGCGGGCG
CGGCGCAGTG CCGCCGACCA TGCCCGCGAG GACCGTACCT GGACCTTCGG TCACCTGATC
GTCGACGAGG CCCAGGAGGT CTCGCCGATG TTGTGGCGGC TGCTGTGGCG GCGCTGCCCG
GGACGCACGG CGACCCTCGT CGGTGACCTG GCCCAGACCG CCCGGCCGGG CGCGCCGGCG
TCCTGGGGGG AGCTGCTGGG GCCCGCGGTC GGCGACCGGT TCACGGTCGA GCGGCTCAGC
GTCAACTACC GCACACCTCA GGAGATCATG GATGTCGCCG CCGACGTCCT GCGGGCGCAG
GACCCGACGG TCTCCGTTCC CCTCTCGGTG CGTTCGGTGG GCTGTGCCCC GACGGCGGTG
CGCGTGGGCG ACGTGACGGC CGACGAAGTC TCGGGCCTCG TCGGTCTGCT CGGGACTGGT
CTGCTCGAGA CTGGTCCGCT GGAGGACAGG CGGACCGTCG CCCAGGCGCA TCCCGGGGAC
CTCGTCGCCG CCGTGGTGTA CGCGGCGAGC CGGGCCGCGA GCGAGGTCGG TGACGGGCGG
GTCGCCGTGA TCTGCCGCCC GCAGGACATC CCGGGGTTGC GCGGCGCCCT CATGGCAGCC
CTCCCGGATT TGGCGGTCGC GGCGGACTCC GTCGACCCCG CCAGCGCCGT CGGCAATGCT
CTCGACGCGC CGGTGGCGGT GCTGAGCGTG GCGGAGAGCA AGGGTCTCGA GTTCGACGCG
GTGGTGCTGG TGGAACCGGC CGCGCTGCTG GCCGGGCCGA CCCGGGGGCT TGCCGACCTC
TACGTCGCGC TGACCCGGGC CACCCGTTTC CTGACCGTGG TGTATTCCGG CGAGCTTCCG
CCGGTGCTGG GCCGGCTTGC CCCGCGGTGA
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| Protein sequence | MPTTQDVERA REQAYLDTLY IRLDEVREIT RGQLRRVLLE SGTGTPQSLV ERDVFAATHA
DRLARLDAAE GRLCFGAMDY ADGRRTYIGR IGLSDSGQEP ILVDWRAPVA TAFYRATLAD
PHGLVRRRHL RTKGREVTGI ADDPLSLPVD MATGTGSGTA TGKSGGVTAS GDTMLLEALA
APRTGRMHDI IATLQAEQDR IIRARANGVL VVDGGPGTGK TAVALHRAAY LLYNDRARLD
QSGVLVVGPS PVFLRYIDQV LPSLGETGVI FATPGRLFPG VDAHGVEDVA TAALKGDPRM
VEVIAAAVRD RQRLPRREVL IPYDDRMLRL GRDTVARART RARRSRRPHN SARRIFLREL
LAELTTQVVN QIPGGLLDAD ERGQITRDLW SEEGVRTALD GLWPLLTPQR LLGELFADPA
ALARAAGSRL TPAERSLLED RRTAAASARI PVQRDGAGTA GTAAVDRADR AWTPADVPLL
DEAAELLGDP DEETGRETAR RAEREREEER EYARGVVDML GLEGQVDAEA LAERWSGPRA
RRSAADHARE DRTWTFGHLI VDEAQEVSPM LWRLLWRRCP GRTATLVGDL AQTARPGAPA
SWGELLGPAV GDRFTVERLS VNYRTPQEIM DVAADVLRAQ DPTVSVPLSV RSVGCAPTAV
RVGDVTADEV SGLVGLLGTG LLETGPLEDR RTVAQAHPGD LVAAVVYAAS RAASEVGDGR
VAVICRPQDI PGLRGALMAA LPDLAVAADS VDPASAVGNA LDAPVAVLSV AESKGLEFDA
VVLVEPAALL AGPTRGLADL YVALTRATRF LTVVYSGELP PVLGRLAPR
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