| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0933 |
|---|
| Symbol | |
|---|
| ID | 3906097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1092200 |
|---|
| End bp | 1094533 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637878267 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480046 |
|---|
| Protein GI | 86739646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGTGG GCACGCTAAC CACGACTGAG GCCCGGCTGA TCCAGGGGCT CTTCGTTCCA
CGGGAGCGTT GGGGCTGGGA GTTCGTCGAC ACCGGTCCAT CGGCCCCGAG CCCGCTCGCC
GACCGTCAAC CGGTCTGGCA GGAGCCCGAA TCGCCCGATC TGACCGCGCT CACGGCCCGG
CGAAACCATG CCGTCCGCGC CCTGCTGACC AGGCTCGTCC TGCCGATGGC CTTCGTGGTG
TTCGGCATGC TGCTCGCGGG CGAGGGGGGG TTCTTCTTCG TCCCGGCGGG ACTCGCGCTC
GCCGTGGTCG CGTGCCTGCC TCCGCTGATC CTGCACTACC GGCTGGGCCG GACACGATCC
CGGGCCGCGT CGGCCCGGGC CGACGGATAC ACCCGCCACC TGCAGGCGTT GACGTCCTGG
CAGACCGAGG TCGACGCGCA CGACCGGGCC GAGCTGCGAC GCCGAGAGGC CACCGCCGTC
TTCTATCCCG TCTCGGCCCC CGCGGCGACC CCCAGGATCG ACGTGTTCGG CGGAACCGGC
GACGGATGGG CGAGCCTGCT GGCCACCGCG GGCTGCTCGG TGCTCACCGG CGGCACCGGC
ATCCTGCTCG TCGATCTCAG CGAGCGGGCG GTGGGCGGGG GGTTGGCACG CCTCGCCGGC
CAGGCGCGCT GGCCGGTGGA GTCCTGGGAC CTGCCCCGCC AGCTCGACGA GGTGGCGCTC
CTCGACGGCC TCGGGCCGCG GGAGGCCGGC GAGCTCGTCG CCGACGCGTT CGGCATGTCC
CAGGAGAGCG GCGATGATCC GCACCGACGC GCCCTGCACG CGGACCTGGT CACCACCGTC
GCCGTCGTTC TGTACGAACG GCTCAGCATT CGCCGTCTCG CCGAGGGCCT GCGCGTCCTC
GAAGGTCTCG ACGACGGCAG CGCGGCCACG TCGCTGTCGA CGGCCGAGGC CGGGGAGCTC
ACCGCGCACA TGGACGCGTT CGGCCGCGGT GACCGGATCG CCGACGAGCT GCGCTACCTG
CGTTCCTCGC TGGAGGCGCT CAGCCCGCCA CCACCAGCCA CGGCCGCGAC GGCACCGGCC
GCGACGGCAC CGGCCGCGAC GGTCGAGGCC CATATGTTGG CGGCCGCCGC CGATATGTCG
ACGGCCAGGA TGCCGACGGC CAGGATGCCG ACGGCCAGGG TCGACAGCGC GCCCCGTCCA
CTGACGGCCT GGTGGCCGGT ACCCGGGCTG CGGGTTCTCG CCACGTCGAG CCGGGACTCG
TCCGCCCACC GCAAGGAACT CACGGACCGG CTCCTCGTCC AGACCGTGCT CCACCAGCTC
CGTTGCCGCC AGCGGGGCGG GCCGACCGGC CGGGACATGC TGGTCGTCGC CGGGGCGGAC
CATCTCGGCC GAGCGGTCCT GACCGGGCTG ACCCGCCACG CCGAGCTCGC CGGGGTGCGG
CTCGTGCTGC TCTTCGAACG GCTCGCCGAC GACGCCGAAC GGGTGCTGGG CAGCCAGGGA
GGCTCGACGA TCATCATGCG ATTGGGGAAC GGTAAGGACG CCGCGACCGC GGCGGAATTC
ATCGGGCGTG GTTACCGCTT CGTCATGTCT CAGGTGACGG CCCAGGTGGG GCGCAGTTTC
ACGGCCGGCG ACAGCGACAG CGTCGGTTAC CAGGACGGCA CCTCGGAGAC GACCGGCACC
AGCGGCGGAA CCGGCCGGAC CTACGACGGC ACCCGGCTGC TGCCCTGGTT GCAGAACACG
TCGAAGAACG CCGGATGGCA GGAGTCGGTG ACGGCGTCGC GATCGCAGAC CTGGCAGCGC
ACGACAAACT CGTCGGTGAG CGACTCGACA ACCGACGGCA CGACCTCCCA GCGGGTATAC
GAGTTCACCG TGGAGCCGAC CACCGTCCAG ACCCTGCCGG CGACCGCGTT CCTGCTGGTC
AACCCGGTCG ATGGGGCGGG ACGGGTGGTG CCGGGGGACT GCAATCCGGG CACCGTCCTG
CTGCCTGGGG TCTCCGCGGC CGACCGCTGG TCCGTACCTG ACGCGGCCGC CACGCCCCTG
GCGGGTCACC ACGTCGGAAC CGCCGGAGCC GACGTGATCC AGGCCGGTAC GGACCAGGCC
GGCCCTGCGC GGACCGGCGC GGAGGAACAG CGTCGGATCG AGCCTGCCCC GCCCGTCGGG
TTTCCGGGCA TCGGCCAGCA ACCGCCGGCC GACGAGGAGG TCTACCGGCT CGTCCCGCCC
AAGGCGCGTC CCAGCGGCCC CGGCAGTCCC GGCGGTCCCG GCGGCCAGAG CACTCACCCG
GGGGCGCGGG GATGGGTTCC CGGCGTCGGG GACCACCACC CGGGGCATGG CTGA
|
|---|
| Protein sequence | MGVGTLTTTE ARLIQGLFVP RERWGWEFVD TGPSAPSPLA DRQPVWQEPE SPDLTALTAR
RNHAVRALLT RLVLPMAFVV FGMLLAGEGG FFFVPAGLAL AVVACLPPLI LHYRLGRTRS
RAASARADGY TRHLQALTSW QTEVDAHDRA ELRRREATAV FYPVSAPAAT PRIDVFGGTG
DGWASLLATA GCSVLTGGTG ILLVDLSERA VGGGLARLAG QARWPVESWD LPRQLDEVAL
LDGLGPREAG ELVADAFGMS QESGDDPHRR ALHADLVTTV AVVLYERLSI RRLAEGLRVL
EGLDDGSAAT SLSTAEAGEL TAHMDAFGRG DRIADELRYL RSSLEALSPP PPATAATAPA
ATAPAATVEA HMLAAAADMS TARMPTARMP TARVDSAPRP LTAWWPVPGL RVLATSSRDS
SAHRKELTDR LLVQTVLHQL RCRQRGGPTG RDMLVVAGAD HLGRAVLTGL TRHAELAGVR
LVLLFERLAD DAERVLGSQG GSTIIMRLGN GKDAATAAEF IGRGYRFVMS QVTAQVGRSF
TAGDSDSVGY QDGTSETTGT SGGTGRTYDG TRLLPWLQNT SKNAGWQESV TASRSQTWQR
TTNSSVSDST TDGTTSQRVY EFTVEPTTVQ TLPATAFLLV NPVDGAGRVV PGDCNPGTVL
LPGVSAADRW SVPDAAATPL AGHHVGTAGA DVIQAGTDQA GPARTGAEEQ RRIEPAPPVG
FPGIGQQPPA DEEVYRLVPP KARPSGPGSP GGPGGQSTHP GARGWVPGVG DHHPGHG
|
|---|
| |