| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0912 |
|---|
| Symbol | |
|---|
| ID | 3906288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1056109 |
|---|
| End bp | 1056600 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637878246 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_480025 |
|---|
| Protein GI | 86739625 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.456299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA CCGCCAACGC CGCCCGTCTG GTCCCCGGCG ACATCGCACC CGACTTCACC
CTGCCCGACT CCGAGGGGAA CGAGGTGTCC CTGGCGTCCT ACCGGGGACG GCGGGTCGTC
GTCTACTTCT ATCCGGCCGC GTCGACCCCG GGGTGCACGA AGCAGGCCTG CGACTTCCGG
GACAGCCTCG CCCAGCTCGA CAACGCCGGC ATCGACGTGC TCGGGATCTC TCCCGACAAG
CCCGCCAAGC TGGTGAAGTT CCGCGACGCG GAAGCCCTGA CGTTCCCGCT GCTTTCCGAC
CCGGAGCGGA AGGTGCTCGC CGCGTACGGC GCCTTCGGCG AGAAGACAAT GTACGGGAAG
AAGACCATCG GCGTGATCCG CTCGACGTTC GTGATCGGCA CGGACGGCAC GATCGAGGTG
GCGCAGTACA ACGTCCGCGC GACCGGTCAT GTCGCCAAGC TGCTGCGCGA TCTGGGCCTC
GCAGCCGCCT GA
|
|---|
| Protein sequence | MTETANAARL VPGDIAPDFT LPDSEGNEVS LASYRGRRVV VYFYPAASTP GCTKQACDFR
DSLAQLDNAG IDVLGISPDK PAKLVKFRDA EALTFPLLSD PERKVLAAYG AFGEKTMYGK
KTIGVIRSTF VIGTDGTIEV AQYNVRATGH VAKLLRDLGL AAA
|
|---|
| |