Gene Francci3_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0883 
Symbol 
ID3905140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1027856 
End bp1028206 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content66% 
IMG OID637878216 
ProductXRE family transcriptional regulator 
Protein accessionYP_479996 
Protein GI86739596 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.901297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGACG TGGAACTGCA GCGCGGTCTG GCGCAGTCAG TGCGCAAGCA CCGCCGCCAG 
CGGGGATGGA GCCAGGCAGC CCTTGCCGAG CGACTCGGGT TGACGCGGAC GACGATCACG
AACATCGAGC ACGGTGCCCA AGGCATCACA CTGCTGACGT TCGTCCGCCT AGCTGAGCAG
CTCAACGTTG GAGCGCCAGA ACTCCTCGCA GAGGTCATCG CGGGACGCCC GGCCCCTTCA
GCGGCGCCAG AAGCGCCCGG CCCCTACCGG GAATGGGTTG CCTCGATCGC ATCGATGCCT
GGCGACGATA ACGTGTCCGC CCACGTTGCC GATGACGGAA ACACGTCGTG A
 
Protein sequence
MQDVELQRGL AQSVRKHRRQ RGWSQAALAE RLGLTRTTIT NIEHGAQGIT LLTFVRLAEQ 
LNVGAPELLA EVIAGRPAPS AAPEAPGPYR EWVASIASMP GDDNVSAHVA DDGNTS