Gene Francci3_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0801 
SymbolsmpB 
ID3905737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp932973 
End bp933452 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID637878134 
ProductSsrA-binding protein 
Protein accessionYP_479914 
Protein GI86739514 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGGG AGACGGGGCG CAGACTGATC GCGCAGAACA AGCGCGCCCG GCATGACTAC 
GACATCCTCG ACACCTACGA GGCTGGGCTG GTGCTCCGTG GCACCGAGGT GAAGGCGCTG
CGGGCCGGGC GGGCCTCGCT CGTCGACGGG TTCGCCCAGA TCAGCGATGG TGAGATCTGG
CTGCACAACG TGCACATCCC CGAGTACACC GAGGGGACCT GGACGAACCA CGCTCCCCGC
CGCAAGCGCA AGATGCTGCT GCACCGGGCG GAGATCGAAA AGCTGGTCGG TAAGACCCAG
GAGGGTGGGC TCACGCTGGT CCCGCTCTCG CTCTACTGGA AGGACGGGCG GGCGAAGATC
GAAATTGCGC TGGCGCGTGG CCGCAAGTCC TACGACAAAC GGCACGCGAT CGCGGAGCGG
GACGCGGCCC GGGAGATCGG CCGGGCGATG GGCCGCCGAG CCAAGGGGCG CTACCTCTGA
 
Protein sequence
MPRETGRRLI AQNKRARHDY DILDTYEAGL VLRGTEVKAL RAGRASLVDG FAQISDGEIW 
LHNVHIPEYT EGTWTNHAPR RKRKMLLHRA EIEKLVGKTQ EGGLTLVPLS LYWKDGRAKI
EIALARGRKS YDKRHAIAER DAAREIGRAM GRRAKGRYL