Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0801 |
Symbol | smpB |
ID | 3905737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 932973 |
End bp | 933452 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637878134 |
Product | SsrA-binding protein |
Protein accession | YP_479914 |
Protein GI | 86739514 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAGGG AGACGGGGCG CAGACTGATC GCGCAGAACA AGCGCGCCCG GCATGACTAC GACATCCTCG ACACCTACGA GGCTGGGCTG GTGCTCCGTG GCACCGAGGT GAAGGCGCTG CGGGCCGGGC GGGCCTCGCT CGTCGACGGG TTCGCCCAGA TCAGCGATGG TGAGATCTGG CTGCACAACG TGCACATCCC CGAGTACACC GAGGGGACCT GGACGAACCA CGCTCCCCGC CGCAAGCGCA AGATGCTGCT GCACCGGGCG GAGATCGAAA AGCTGGTCGG TAAGACCCAG GAGGGTGGGC TCACGCTGGT CCCGCTCTCG CTCTACTGGA AGGACGGGCG GGCGAAGATC GAAATTGCGC TGGCGCGTGG CCGCAAGTCC TACGACAAAC GGCACGCGAT CGCGGAGCGG GACGCGGCCC GGGAGATCGG CCGGGCGATG GGCCGCCGAG CCAAGGGGCG CTACCTCTGA
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Protein sequence | MPRETGRRLI AQNKRARHDY DILDTYEAGL VLRGTEVKAL RAGRASLVDG FAQISDGEIW LHNVHIPEYT EGTWTNHAPR RKRKMLLHRA EIEKLVGKTQ EGGLTLVPLS LYWKDGRAKI EIALARGRKS YDKRHAIAER DAAREIGRAM GRRAKGRYL
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