| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0765 |
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| Symbol | |
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| ID | 3905794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 890225 |
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| End bp | 890938 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637878098 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_479878 |
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| Protein GI | 86739478 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.272345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG AGGAGCAGCG CTCTGAGGAG ATGCTGCCGA CGCCATCGGA GGCGAACCCC
ATCCGGGTGC TGATCGTTGA CGACCATGCG CTGTTCCGGC GTGGGCTGGA GATGGTGCTG
GGGCAGGAGG TTGACATCGA GGTCGTCGGG GAGGCCGCGG ACGGTGCCGA GGCGGTGACC
ATGGCTAAGG AGATGGCGCC GGACATCGTG CTCATGGATG TGCGGATGCC GCGCCGTGGC
GGGATCGACG CCACGAGCGC CATCAAGGAG GCTGTCCCGA GCGCCAAGAT CGTCATGCTG
ACCATCAGCG ACGAGGAGGC CGACCTCTAT GACGCGATTA AGGCGGGGGC CATGGGCTAC
CTGCTGAAGG AGATCTCTAT CGACGAGGTC GCCGCGGACA TCCGCGCCGT GTACGGGGGG
CAGAGCCTCA TCAGCCCGTC CATGGCGTCG AAGCTGCTCA GCGAGTTCGC AGCCATGATT
AAGAACAAGG ATGACCGTCC GCAGCTCCCT ACCCCCCGGC TGACCGACCG GGAGATGGAG
GTGCTGCGGC TCGTCGCCAA GGGCATGAAC AACCGTGACA TCGCCAAGCA GCTCTACATC
AGTGAGAACA CGGTCAAGAA CCACATCCGC AACATCCTGG AGAAGCTCCA GCTGCACTCC
AGGATGGAGG CGGTCGTGTA CGCGGTCCGG GAGAAGCTGC TCGAGATCAC CTGA
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| Protein sequence | MTVEEQRSEE MLPTPSEANP IRVLIVDDHA LFRRGLEMVL GQEVDIEVVG EAADGAEAVT
MAKEMAPDIV LMDVRMPRRG GIDATSAIKE AVPSAKIVML TISDEEADLY DAIKAGAMGY
LLKEISIDEV AADIRAVYGG QSLISPSMAS KLLSEFAAMI KNKDDRPQLP TPRLTDREME
VLRLVAKGMN NRDIAKQLYI SENTVKNHIR NILEKLQLHS RMEAVVYAVR EKLLEIT
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