| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0754 |
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| Symbol | |
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| ID | 3905822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 875722 |
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| End bp | 878364 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878087 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_479867 |
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| Protein GI | 86739467 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGTCTG TCGGACGGGA GTCGAGCACT CCATCTCAAG CCACCCCGCC CCCGCGCGCG
AGCAAGCCGG CCGACCCGAG CAAGCCGGCC CGGCCGGGTG TCCCGTCGCG CGCCGTCGCG
CCGGAACGTG CCCCCGCCCC GCCCCGATCC GCCGCATCGC CCCGATCCGC CGCATCGCCC
CGATCCGCCG CATCGCCCCG ATCCGCCAGG CCATCCCGAT CCGCCAGGCC GGGCAACGTG
GCGAGCGGCG TCACCTATGC GGACGACGGC GCTTCCGCGC GTCGCTCCCC CGGCGGCACG
GGCGACGGTC CGGCCGCAGC CGGCGCGGCC GGGGCCGGTG GAGCGGGTAG GCCGCTCAAC
CCCCGTCCGC CCGTGAACCG GCGTCGGGTC CTGAAGAAGA TGGGGCTGAC GGCGATCGTT
CTGGGGCTGG TCGTCGCGTT GTTGTCCCTG CCGTTCGTCG GTGCGGTCGG CCTGTTCGCC
AAGGAAAGCG CGGACCACTT CCTCGGGCTG CCCGGCGAGC TCGTCACGCC TCCGTTGCCG
CAGAGTTCGA CGATTCTGGC CGCCGACGGA TCAGTGATTG CCACGTTGCG CGGCGCCGAG
AACCGCATCG TCGTGCCCGG CAACGAGATC CCGAAGATCA TGCGCGAGGC GATCGTCTCG
ATCGAGGACG CCCGCTTCTA CAAGCACGGC GGCGTCGACC CACAGGGCGT CTTCCGCGCC
GCGCTGCGCA ACAGCGAGGC CGGCGGAGTC GCTCAGGGCG GTTCGACGCT GACTCAGCAG
TACGTCAAGA ACGTGCTGCT GCAGAACGCC CGCACCACGC GGGAGCGAGA GGTCGTGGCC
GGAGACTCCC TGGACCGCAA GATCCAGGAA CTCCGGTACG CCCTGGACAT CGAGAAGCGG
TTCTCCAAGG ACGAAATCCT GGAGCGCTAC CTCAACATCG CGTATTTCGG TGACGGCGCG
TACGGGATCG GCACCGCCGC CGAGCACTAC TTCGGGGTGC CCATCTCCCA GGTCACCCTC
GAACAGGCGG CGCTGCTAGC CGGGCTCGTG CAGAGTCCGT CCCGGTACAA CCCCGCAGCT
CACCCGGAGG CCGCGCTGGC CCGGCGCAAC ACCGTGCTGG ACAAGATGGC CGCCGAGGGG
TATGTCTCTA CCACCCAGGC GGAGGCGGCG AAGCAGCTGC CGCTGAACGT CGTGAAAGCC
CCGCCGCCAG CCGCGGACTC CTGCGAGACG TCGTCGGCGC CGTTCTTCTG CGACTACGTG
CGCTCCCAGC TGCGGGCGAG CCCGGCGCTC GGTTCCACCC TGGAGGAACG CAACCGACGC
ATCTACGAGG GCGGCCTGGT CATCAGGACC ACTCTCGACC CACTGGTGCA GCAGGCGGCG
CAGGACGCCG TCAACTCGAC CATATCGCCG AGCAACCGGG TGTCGGCGAC CGAGGTCGTC
ATCCAGCCCG GTACCGGCAA CATCCTCGCC ATGGCAGTGA ACCGGGTGTA CGGCTCGAAC
ACAGCAGCCA ACCAGACGGT GGTGCCGCTG CCGACCAACG CCACCTTCCA GCCCGGGTCG
ACGTTCAAGA CCTTCGTGCT CGCCGCCGCG CTCGAACAGG GCTACGGCAC CTCGACGGCC
TTCTACTCCC CGGCCTGCTA CGAGAGCAAG AAGTTCCCGT TGGACCGCGG TGAGGGCGAC
TGCCCCAGGG GTTTCTCGAA CTCCGATCCC GCCGAGGCCG GCATCTACGA CATCCCCAAG
GGCACCTGGG ACTCGGTGAA CACCTTCTAC GTGCAGCTCG CGGAGAAGAC CGGCATCCCG
GCGGTCCTGG AGATGGCCAA ACGCCTGGGC GTCACACCGC CGAAGGCGGA CAAGATCGGC
TCCACCGACG GGGCCACCGC CATCGGTGGC GGCCAGTACA TGTACGTTTC CCCGTTGCAG
ATGGCCGACG CCTACGCGAC GATCGCCGGC GGCGGGGTGC GCTGCACGCC CCGCTTCGCC
ACCGGGGCCG TCGACTCCAG CCACGACCCG ATCGACATCG CCCAGCCGCC GCAGTGCGAA
CAGGTACTCG CCAAGGGTGT CGCCGACACC GTGACCAGCG TGCTCGCCGG CGTCCCGCTC
CACGGGACCG GGACCAAGGC GGCCATCGAC CGCCCCTCGG CGGGCAAGAC CGGCACCACC
GACGAGTTCT CGGCCGCCTG GTATGTCGGC TTTACCCCGC AGATCACCGC AGCGGTAGCC
GTCGGCGATC CCATGGGAGC GGAGAGCCAC CCGCTGCGGG GCGTCGTCGC CGACGGCCGG
ACCTGGCCCC GTGTCTTCGG CGGCGACCTG CCCGCGATCA TCTGGAGCAA GTCGATGCGG
GCCGCCCTAG CCAACCAGCC GGTAGTCCCG TTGCCCGGTG CCGATCCGAC CGTCGCGCGC
GGCATCAAGG GAGGTCTGCA GAACACCCCG CCAGCGCCGG CACCCGGTCA GGGCCTCGGC
GACCTGTTGC AGAACCTGGG TCAGCAGATC TTCCCTGGCA CGGGCGGGCA GCCGCAGGGA
GGCGGCACCC CGCTCGGCCA GCCCGGCACG GACCAGAGCG GGCAGAACCA GGGACAGCCG
CAGCAACCCC AGAACGGCGC CGAACCGGGA TCCGGCAGAG GGGATCAGCC TGCCGCCCAC
TAG
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| Protein sequence | MTSVGRESST PSQATPPPRA SKPADPSKPA RPGVPSRAVA PERAPAPPRS AASPRSAASP
RSAASPRSAR PSRSARPGNV ASGVTYADDG ASARRSPGGT GDGPAAAGAA GAGGAGRPLN
PRPPVNRRRV LKKMGLTAIV LGLVVALLSL PFVGAVGLFA KESADHFLGL PGELVTPPLP
QSSTILAADG SVIATLRGAE NRIVVPGNEI PKIMREAIVS IEDARFYKHG GVDPQGVFRA
ALRNSEAGGV AQGGSTLTQQ YVKNVLLQNA RTTREREVVA GDSLDRKIQE LRYALDIEKR
FSKDEILERY LNIAYFGDGA YGIGTAAEHY FGVPISQVTL EQAALLAGLV QSPSRYNPAA
HPEAALARRN TVLDKMAAEG YVSTTQAEAA KQLPLNVVKA PPPAADSCET SSAPFFCDYV
RSQLRASPAL GSTLEERNRR IYEGGLVIRT TLDPLVQQAA QDAVNSTISP SNRVSATEVV
IQPGTGNILA MAVNRVYGSN TAANQTVVPL PTNATFQPGS TFKTFVLAAA LEQGYGTSTA
FYSPACYESK KFPLDRGEGD CPRGFSNSDP AEAGIYDIPK GTWDSVNTFY VQLAEKTGIP
AVLEMAKRLG VTPPKADKIG STDGATAIGG GQYMYVSPLQ MADAYATIAG GGVRCTPRFA
TGAVDSSHDP IDIAQPPQCE QVLAKGVADT VTSVLAGVPL HGTGTKAAID RPSAGKTGTT
DEFSAAWYVG FTPQITAAVA VGDPMGAESH PLRGVVADGR TWPRVFGGDL PAIIWSKSMR
AALANQPVVP LPGADPTVAR GIKGGLQNTP PAPAPGQGLG DLLQNLGQQI FPGTGGQPQG
GGTPLGQPGT DQSGQNQGQP QQPQNGAEPG SGRGDQPAAH
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