Gene Francci3_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0732 
Symbol 
ID3905859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp847461 
End bp848174 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID637878065 
Productmethyltransferase type 11 
Protein accessionYP_479845 
Protein GI86739445 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.358682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGG TGCGGGACGA CGCCCTCGCC TTCGTGGGCC ATCAGGTACA TGTCATGCGC 
CGCCGGGAGG TCGGCACCCT GCTGTCGTGG GCGGGAGAAC TGGCCGGGCG CACCCTGCTC
GATGTGGCCG GCGGTGACGG CTACTGGGCC GGCCAGGCCG TCCGTCGCGG GGCTCGGGCG
GTGTGCCTCG ACCTCGCCCG GCACAAGCTG CAGTTCGGTC GCCGGCTGCG CGGGCATCCC
GGGCTCGTCG AGGGGGACGC CTTGGCGCTG CCGTTCGCCG CGGCCACGTT CGACGTCGTC
ATGTCGGTCT GCGCCATCGA GCACTTCGAC GATGGTCCGG CCGCGCTTGC CGAGATGGCG
CGGGTGCTGC GTCCGGGTGG CGACCTGGTG ATGTCCGCCG ACGCCCTCAC CCGGGCGGCG
TCCTGGCCGG ACCTGTTCGA CCGGCACCGC GAGCGCTACC ACGTCAGGCA CACCTATTCC
GGCGACCATC TCGCCAAGCT GCTCGATGAT GTCGGGCTTG AGGTCATCCG GCAGACGTAC
ATGTTCCGCA GCGAACGCGC CGAGCGGCTC TACCTGACTT TGTCCGCCAA GGGCGGCAGG
ACGGGATGGA ACGCCGCGGC CGTGCTCTCG CCGGCCGTCG CCCTGTCGGA CCGGCGGGCT
CCCGACACCG CGGGCAGCGT CGTACTCACC CACGCCCGCA GACGGGAGGG CTGA
 
Protein sequence
MSPVRDDALA FVGHQVHVMR RREVGTLLSW AGELAGRTLL DVAGGDGYWA GQAVRRGARA 
VCLDLARHKL QFGRRLRGHP GLVEGDALAL PFAAATFDVV MSVCAIEHFD DGPAALAEMA
RVLRPGGDLV MSADALTRAA SWPDLFDRHR ERYHVRHTYS GDHLAKLLDD VGLEVIRQTY
MFRSERAERL YLTLSAKGGR TGWNAAAVLS PAVALSDRRA PDTAGSVVLT HARRREG