Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0711 |
Symbol | |
ID | 3903501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 813609 |
End bp | 815189 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637878044 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_479824 |
Protein GI | 86739424 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGC CGGCCCTGCC GTCCGCGTTG GACCCACGTG GGCCCCGTCG CCACCGCTCC CCGCTGCGAC GGCTGTCCGT TGGAGCCGTC GCTCTGCTGT CCGTGCTGGT TCTCGGTCTG AGCACCATCG GGTGGGCCGC CTACCGACAG TTCGACAAGG CCGTCACGCG CGTCGACTGG GACATCGAGG GTGCCCGCCC GGCGAGCGCG GACGGCGAGG AGAACGTCCT GCTGCTCGGC GACGACAGCC GGGAGGGCAC CGGGGGTGAG TACGGCGTGG TGGACGGCGT CCGGTCCGAC ACCACCATCA TCGCCCACTT CGGCAAGGAC GGCTCGGCCA CGTTACTGTC CTTCCCCCGG GACATGCTCG TCCCGGTGGT GCCGCGGGAG AAGGCCACCG CCCACGACGG CCGGTCGAAG CTCACCGAGG TGCTCGGGCT GGCGGACGTC CCCGGTCTCG TCACCACGCT GGAGTCCCTG ACCGGCCTGA AGATCGACCA TACCATCTCG ATCAATCTCG CCGGTTTCAA GACGATGACC GACGCGGTGG GAGGCGTGAG CGTGTGCGTG ACGCCCCTAC CGAACGGCAG CACCCGCAAC CTGCACGACT CGATGTCGGG ATGGAGCGGA CGGCTCGGCG AGAACCGTCT CAACGGTGAT CAGGCGCTGG CCTTCGTCCG GACCCGTTAC GCGCTCGGGG ACGAACGCCT TCGCATTCTG CGCCAGCAGC AGTTCCTCTC CAAGCTGCTG GCGACAGCGA CCAGCAGCGG AGTGCTCACC AACCCAGCCA AGATCACTTC ACTGATCGGT GCGGTCGGCA GCGCGCTGCG GATCGACCAG GGTCTCGACC AGACCGCGAT GCTCAAGCTC GCGAAGCGGG TCAGCGAGCT GGGTCCGGGA AGAATTCACT TCGTGACAGT CCCTACGCAC ATCGCGCTGC GCTCCGATGG CGCGGTTGAC GACCTGGGTT CGATTCCCCC GCACGGGGCC GTACTCATCG TCGATCAGGC CGGCCTCGAC CAGGTCCTCG CTCCGCTGCT GCCCGCGGGC ACCAAGCCTC CCGCACAGCG AACTCTCGAC CCCGCCCAGG TCTCGATCGC CGCCGTCCGC AACGCCTCGG GACGTGCCGG ACTCGCCACC GGCACGGTCG ACGGACTGCG GGCACGCGGC TTCACTGGGC CGATGACCGC CGCGACATCG ACCCGCCAGA CTCTGACCGA GGTACGCCAT CCCCCGGGCC AGGAGGCTGC GGCACGCACC CTGGCGGCGA CGATCCCCGG CAGCCGGATC GTCGCGGACG CCGGCCGCTC CGGGGCCGGC CTCGTCCTCG TCCTCGGATC CACCTTCACC GGCCTGCCCA GCTCCGGCCT GCCCAGCGGT GGGCTGCCGG GCGCGGCGGC AACCGTCGGC ACGAGGATCT CGACGACCTC GACCGCCGCC GGTGGTGACA CCCGGGCGAC CACGATCGGC GGCACCGCGA CGCCGACCCC GGCGGCCGGC GGGGCCGGCG TCGGCGGCAC CACAGGCACC GCGGCCGCTC CGGTCGGTCC CGTTCCCTCC GACCCCTCGT GCACGCCATG A
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Protein sequence | MRPPALPSAL DPRGPRRHRS PLRRLSVGAV ALLSVLVLGL STIGWAAYRQ FDKAVTRVDW DIEGARPASA DGEENVLLLG DDSREGTGGE YGVVDGVRSD TTIIAHFGKD GSATLLSFPR DMLVPVVPRE KATAHDGRSK LTEVLGLADV PGLVTTLESL TGLKIDHTIS INLAGFKTMT DAVGGVSVCV TPLPNGSTRN LHDSMSGWSG RLGENRLNGD QALAFVRTRY ALGDERLRIL RQQQFLSKLL ATATSSGVLT NPAKITSLIG AVGSALRIDQ GLDQTAMLKL AKRVSELGPG RIHFVTVPTH IALRSDGAVD DLGSIPPHGA VLIVDQAGLD QVLAPLLPAG TKPPAQRTLD PAQVSIAAVR NASGRAGLAT GTVDGLRARG FTGPMTAATS TRQTLTEVRH PPGQEAAART LAATIPGSRI VADAGRSGAG LVLVLGSTFT GLPSSGLPSG GLPGAAATVG TRISTTSTAA GGDTRATTIG GTATPTPAAG GAGVGGTTGT AAAPVGPVPS DPSCTP
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