Gene Francci3_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0686 
Symbol 
ID3905274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp784451 
End bp785551 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content68% 
IMG OID637878019 
Productadenosine deaminase 
Protein accessionYP_479799 
Protein GI86739399 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.132633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG ACGCACGGTC CCCGACGATC ACGGTCGAGG ATATCCGCCG GGTACCGAAG 
GTACTGCTTC ATGATCATCT TGATGGCGGG CTCCGGCCGG CCACGGTGGT AGAGCTCGCC
GACGAGACCG GTTACCGCGA TCTGCCGACC ACGGACGTCC ACGCCCTGAG CACCTGGTTC
CGTGGCGGCG CGCACAGCGG TTCGCTCGTC CGCTACCTGG AGACGTTCCG GCACACGGTG
GGGGTGATGC AGACCCAGGA TGCGATCATG CGGGTGGCGC GGGAGTGCGC GGAGGATCTC
GCGGCCGACG GCGTCGTCTA CGCCGAGGTG CGGTTCGCAC CCGAGCTGCA CCTCGAGCGC
GGGCTGTCCC TGGACGCGGT GGTCGAGGCC GTGCTTGACG GGTTCCGAGC CGGTTCGGCC
GGCACACCGC TGCACCTTCG CGCCCTGCTC ACCGCGATGC GCCATCAGGC CCGTTCGCTG
GAGATCGCGC AGCTCGCGGT CCGGTGGCGC GATGCCGGCG TGGTCGGGTT CGACATCGCG
GGCGCCGAGG CGGGTAATCC GCCCACCCGT CACCTGGATG CCTTCCAATA CATCCAGCGG
GCGAACGGCC ACTTCACGAT CCATGCGGGC GAGGCGTTCG GCCTGCCGTC GATCTGGGAG
GCCGTGCAGT GGTGCAACGC CGATCGGCTG GGGCACGCAG TGCGCATCGT CGATGACATC
ACGGTCGATC CGGACGGTAA GGCGATCCTC GGTGATCTCG CGAACTACGT GCGCGACGTC
CGGGTGCCGC TGGAGATGTG TCCCTCGTCG AACGTGCACA CCGGAGCCGC GCCAAGCATC
GAGCGGCACC CCATCGGGCT GCTTCGCCGG CTGCAGTTCC GGGTCACGGT CAACACGGAC
AACAGGCTGA TGAGCGGCGT GTCGCTGTCG AGTGAGTTCG CGACCCTCGT GGACGTCAAC
GGCTACGGCT GGTCCGACAT CCGCTGGCTT ACCCTCAACG CGATGAAGTC CGCCTTCCTG
CCCTTCGACC GGCGGCTCGA TTTCATCAAC GACGTCATCA AGCCGGGCTA TGCGGAGCTC
GTCTCCGCGG AGTCAGCCTG A
 
Protein sequence
MTNDARSPTI TVEDIRRVPK VLLHDHLDGG LRPATVVELA DETGYRDLPT TDVHALSTWF 
RGGAHSGSLV RYLETFRHTV GVMQTQDAIM RVARECAEDL AADGVVYAEV RFAPELHLER
GLSLDAVVEA VLDGFRAGSA GTPLHLRALL TAMRHQARSL EIAQLAVRWR DAGVVGFDIA
GAEAGNPPTR HLDAFQYIQR ANGHFTIHAG EAFGLPSIWE AVQWCNADRL GHAVRIVDDI
TVDPDGKAIL GDLANYVRDV RVPLEMCPSS NVHTGAAPSI ERHPIGLLRR LQFRVTVNTD
NRLMSGVSLS SEFATLVDVN GYGWSDIRWL TLNAMKSAFL PFDRRLDFIN DVIKPGYAEL
VSAESA