| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0678 |
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| Symbol | sdhB |
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| ID | 3905266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 774693 |
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| End bp | 775391 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637878011 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_479791 |
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| Protein GI | 86739391 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000352148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0375147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTCA CCCTCAAGAT CCGTCGCTAC GACCCGGAGA CGGTCGACGA GGCGCACTGG
GAGAGCTACC AGGTGCCGTT CGATCCGAGC GACCGGCTGC TCGACGCAAT CATGTGGGTC
AAGTGGAACC TCGACGGGAC GCTCGCCTTC CGCCGGTCCT GCGCGCACGG GGTGTGCGGC
TCGGATGCGA TGCGGGTCAA CGGCGCCAAC CGCCTCGCCT GCAAGGTGCT GGTGAAGGAC
CTCGGCTCGG AGATCACCAT CGAACCGATC AAAGGTCTGC CGGTAGAGAA GGACCTCATC
GTCGACATGG AACCGTTCTT CGACGCGTTC CGGGCAGTGA AGCCCTACCT GATCACGGAC
GACCACGAGC CGACCCGCGA GCGGCTGCAG TCCACCGAGG ACCGGGCCCG CTTCGACGAC
ACGACCAAGT GCATCATGTG CGCGGCGTGC ACCACCGCGT GCCCGGTGTT CTGGACCGAC
GGCGACTACT TCGGCCCGCA GGCGATCGTC GCGGCCCACC GGTTCATCTT CGACAGCCGT
GACTCCGGTA CCGACGAGCG CCTGGAGATC CTCAACGAAC GCGAGGGGGT CTGGCGTTGC
CGGACCACCT TCAACTGCAC CGACGCCTGT CCACGCGGCA TCCAGGTGAC CAAGGCCATC
CAGGAAGTCA AGCGGGCGCT GTTGTTCCGC CGCGTCTGA
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| Protein sequence | MTVTLKIRRY DPETVDEAHW ESYQVPFDPS DRLLDAIMWV KWNLDGTLAF RRSCAHGVCG
SDAMRVNGAN RLACKVLVKD LGSEITIEPI KGLPVEKDLI VDMEPFFDAF RAVKPYLITD
DHEPTRERLQ STEDRARFDD TTKCIMCAAC TTACPVFWTD GDYFGPQAIV AAHRFIFDSR
DSGTDERLEI LNEREGVWRC RTTFNCTDAC PRGIQVTKAI QEVKRALLFR RV
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